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Domain assignment for ENSSSCP00000019004 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000019004
Domain Number 1 Region: 93-164
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3e-21
Family Cold shock DNA-binding domain-like 0.0000122
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000019004   Gene: ENSSSCG00000017938   Transcript: ENSSSCT00000019522
Sequence length 365
Comment pep:novel chromosome:Sscrofa10.2:12:54889099:54894307:-1 gene:ENSSSCG00000017938 transcript:ENSSSCT00000019522 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSEAEAAVVATAAPAATVPATAAGVVAVVVPVPAGEPQKAGGGAGGGGVGAASGPAAGTP
SAPGPRTPGNPATAASGTSAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKED
VFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPNRR
RFRRFIPRPRPAAPPPMVAEAPSGGTEPGSEGERAEDSGQRPRRRRPPPFFYRRRFVRGP
RPLNQQQPLEGTDGVEPKETAPLEGDQQQGDERVPPPRFRPRYRRPFRPRPPQQPTTEGG
DGETKPSQGPTDGSRPEPQRPRNRPYFQRRRQQPPGPRQSAAPEVGTWDRPAGVCRGETE
AASLS
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Identical sequences ENSSSCP00000019004 9823.ENSSSCP00000019004 ENSSSCP00000019004

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