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Domain assignment for ENSSSCP00000019910 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000019910
Domain Number 1 Region: 418-550
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 3.97e-32
Family DEP domain 0.0000222
Further Details:      
 
Domain Number 2 Region: 12-91
Classification Level Classification E-value
Superfamily Ubiquitin-like 1.76e-24
Family DIX domain 0.0019
Further Details:      
 
Domain Number 3 Region: 244-356
Classification Level Classification E-value
Superfamily PDZ domain-like 1.86e-23
Family PDZ domain 0.0000257
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000019910   Gene: ENSSSCG00000025689   Transcript: ENSSSCT00000028958
Sequence length 736
Comment pep:novel chromosome:Sscrofa10.2:3:139857805:139865866:-1 gene:ENSSSCG00000025689 transcript:ENSSSCT00000028958 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAGSGAGGGGVGETKVIYHLDEEETPYLVKIPVPAERITLGDFKSVLQRPAGAKYFFKSM
DQDFGVVKEEISDDNARLPCFNGRVVSWLVSSDNPQPEMAPPAHEPRTDLAPPPPPLPPL
PPERTSGIGDSRPPSFHPNVSSSRENLEPETETESVVSLRRERPRRRNSSEHGAGGHRPS
GPSRLERHLAGYKSSSTLLTSELESTSLGDSDEDDTLSRFSSSTEQSSASRLLKRHRRRR
KQRPPRLERTSSFSSVTDSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIM
KGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLRDIVHKPGPIVLTVAKCWDPSPQ
AYFTLPRNEPIQPIDPAAWVSHSAALTGTFPAYPGSSSMSTITSGSSLPDGCEGRGLSIH
TDMASVTKAMAAPESGLEVRDRMWLKITIPNAFLGSDVVDWLYHHVEGFPERREARKYAS
GLLKAGLIRHTVNKITFSEQCYYVFGDLSGGCESYLVNLSLNDNDGSSGASDQDTLAPLP
GATPWPLLPTFSYQYPAPHPYSPQPPPYHELSSYTYGGGSASSQHSEGSRSSGSTRSDGG
AGRTGRPEDRAPESKSGSGSESEPSTRGGSLRRGGESGGTGDGGPPPSRGSSGGAPNVRG
HPGLHPYGPPPGVALPYNPMMVVMVPPPPPPVPPAVQPPGAPPVRDLGSVPPELTASRQS
FHMAMGNPSEFFVDVM
Download sequence
Identical sequences ENSSSCP00000019910 ENSSSCP00000019910

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