SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000020712 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000020712
Domain Number 1 Region: 1-90
Classification Level Classification E-value
Superfamily DEATH domain 4.24e-24
Family Pyrin domain, PYD 0.0028
Further Details:      
 
Domain Number 2 Region: 448-511
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 3.51e-16
Family B-box zinc-binding domain 0.0021
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000020712
Domain Number - Region: 386-435
Classification Level Classification E-value
Superfamily RING/U-box 0.000135
Family RING finger domain, C3HC4 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000020712   Gene: ENSSSCG00000029823   Transcript: ENSSSCT00000028537
Sequence length 645
Comment pep:novel scaffold:Sscrofa10.2:GL893042.1:17578:29935:-1 gene:ENSSSCG00000029823 transcript:ENSSSCT00000028537 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAKTPSDHLLYSLEELVPYDFEKFKFKLQNTSLEKEHSRIPRGQLQTAQPVKLAMLLVTH
YGEDYAVQLTLQVLRAINQHLLAEELHRAISPEYQIQENDTDSSATSCSSREIKPKSLKI
LDGLEGDKQRQSSDGAGCPPSMQPEAGKGPQKKPQVKRRDQKGPEGLDAQSKPGARNMTT
SSKRSPLQAPGGEGEQARCQPPQKCQLCRKAPGPGRGLAGEGENLRSLKPIYPQERSDPK
VLKEIESLHPETLLLQEKMGSENPGSAATPSEMATLNVCAPVAPEKGSRNLEHSMTLQGG
ALRNTLSNISLAAKKKTWERPESTAPPEKKGTEAPESSRTVEEVAGGVLHVPSNPKGPLS
SGKKGPQNPGDSASLGDSSAAMSSGRLQNEAVCPLCRTQQADPVGGSCAHNSCSFSVAPE
ASRGHSPSCLGCQDMFPGKSCGSHEQQSPKSLPQCERHKQQVQLLFCEDHGEPICLMCGL
SPEHRGHRVRPIEEAALEYKEEIQKQLEHLKELRKSGEEERSQGHKKTVNFLKQAETQKQ
RVQYQLEQLCQFLEQQEQLFVTWLDEVGQTINHVRKTYGTHELIGELEAKQCQPEWELMK
DIRVTLHRAKMVTDPELWTAPPEVKEKIHLLYQRSEFVERSMKHF
Download sequence
Identical sequences ENSSSCP00000020712

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]