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Domain assignment for ENSSSCP00000021769 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000021769
Domain Number 1 Region: 11-58
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.0000633
Family WD40-repeat 0.031
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000021769
Domain Number - Region: 236-279
Classification Level Classification E-value
Superfamily 6-phosphogluconate dehydrogenase C-terminal domain-like 0.0782
Family Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000021769   Gene: ENSSSCG00000029729   Transcript: ENSSSCT00000028310
Sequence length 369
Comment pep:novel chromosome:Sscrofa10.2:3:130558674:130595884:1 gene:ENSSSCG00000029729 transcript:ENSSSCT00000028310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLSIKFYSRQGQEQDGIFKMSLSPDGTLLAAIHFSGKLSIWAIPSLKQQGEWSQNEQPGY
DDLNPDWRLSTEKRKKIKDKESFYPLIDVNWWMDSAVTLARCSGALTVSSVKTLKNLLGK
SCEWFEPSPQVTATHDGGFLSLECEIKLAPKRSRLETRGAEEDEGEEDSDSDQETSTKAR
YFGYLQQGLYLVTEMERFAPPRKRPRTISKHYRLVSLRSTTPEELYQRKIESEEYEEALS
LAQTYGLDTDLVYQRQWRKSAVNSASIQNYLSKIKKRSWVLHECLERVPENVDAAKELLQ
YGLKGTDLEALLAIGKGADDGRFTLPGDVDIDSISYGELSPADEEPAKKKKDKELKKRQE
LLKLVNFSK
Download sequence
Identical sequences ENSSSCP00000021769 ENSSSCP00000021769

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