SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000022004 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000022004
Domain Number 1 Region: 160-308
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 1.96e-29
Family Toll/Interleukin receptor TIR domain 0.0012
Further Details:      
 
Domain Number 2 Region: 24-105
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000179
Family I set domains 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000022004   Gene: ENSSSCG00000024389   Transcript: ENSSSCT00000025225
Sequence length 410
Comment pep:known_by_projection chromosome:Sscrofa10.2:2:162285371:162291360:-1 gene:ENSSSCG00000024389 transcript:ENSSSCT00000025225 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAGVCDRALDFLSPSGNQVLGPALGSAVTLNCTASVVSGPHCPLPSVQWLKDGLPLGNGS
HHDLHEDSWVKANWSEVLVSSVLGVNLTSTEDFGTFTCSIQNVSSSSFILRRAGLAGHVA
TVLASVMVLLALLLAALLYVKCRLNVLLWYQDKYGEVEMNDGKLYDAYVSYSDSPEDRKF
VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLVVVLSDAFLGRAWCSH
SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW
KELQLALPRKVQYRAMEGDPQTRLQDDKDPMLIVGGRGPEGRTLDPELDPDPEGDLGVRG
PVFGEPAVPSHASGVSLGEGRGSEVDVSDLGSRNYSARTDFYCLVSEDDV
Download sequence
Identical sequences I3LD75
ENSSSCP00000022004 ENSSSCP00000022004

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]