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Domain assignment for ENSSSCP00000028903 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000028903
Domain Number 1 Region: 487-795
Classification Level Classification E-value
Superfamily L domain-like 1.81e-46
Family Ngr ectodomain-like 0.015
Further Details:      
 
Domain Number 2 Region: 49-256,298-435
Classification Level Classification E-value
Superfamily RNI-like 1.41e-38
Family Cyclin A/CDK2-associated p19, Skp2 0.061
Further Details:      
 
Domain Number 3 Region: 883-1039
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 2.75e-34
Family Toll/Interleukin receptor TIR domain 0.0000603
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000028903   Gene: ENSSSCG00000012117   Transcript: ENSSSCT00000035124
Sequence length 1050
Comment pep:known chromosome:Sscrofa10.2:X:10451005:10476655:1 gene:ENSSSCG00000012117 transcript:ENSSSCT00000035124 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVFPVWTLKRQFLILFNIVLISELLGARWFPKTLPCDVSLDAPNAHVIVDCTDKHLTAIP
GGIPTNATNLTLTINHIASITPASFQQLDHLVEIDFRCNCIPVRLGPKDNLCTRRLQIKP
SSFSKLTYLKALYLDGNQLLEIPRDLPPSLQLLSLEANNIFWIMKENLTELANLEMLYLG
QNCYYRNPCNVSFSIEKDAFLSLRNLKLLSLKDNNISAVPTVLPSTLTELFLYNNIIAKI
QEDDFNNLSQLQVLDLSGNCPRCYNVPFPCTPCENNAPLQIHLHAFDALTELQVLRLHSN
SLQYVPQRWFQNLNKLKELDLSQNFLAKEIGDAKFLHLLPNLVKLDLSFNYELQVYHTFM
NLSDSFSSLKNLKVLRIKGYVFKELKSLNLSPLRNLPNLEVLDLGTNFIKIANLSIFKQF
KTLKFIDLSVNKISPSGDSSESGFCSGMRTSAESHGPQVLESLHYFRYDEYARSCRFKNK
EPSSSLPLNEDCSMYGQTLDLSRNNIFFIRSSEFQHLTFLKCLNLSGNSISQALNGSEFQ
PLVELKYLDFSNNRLDLLHSTAFEELRNLEVLDISSNSHYFQSEGITHMLDFTKNLKVLK
KLMMNNNDIATSTSTTMESESLRILEFRGNHLDILWRDGDNRYLKFFKNLHKLEELDISE
NSLSFLPSGVFDGMPPNLKTLSLAKNGLKSFNWGKLQYLQNLETLDLSYNQLKTVPERLS
NCSRSLKKLILKNNEIRNLTKYFLQDAFQLRHLDLSSNKIQVIQKTSFPENVLNNLQILF
LHHNRFLCNCDAVWLVWWVNHTEVTIPFLATDVTCMGPGAHKGQSVVSLDLYTCELDLTN
FVLFSLSLSAVLFLIVITIANHLYFWDVWYSYHFCKAKIKGYQRLISPNSCYDAFIVYDT
KDPAVTEWVLDELVAKLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSKKTVFVMTD
KYAKTEKFKIAFYLSHQRLMDEKVDVIILIFLEKPLQKSKFFQLRKRLCGSSVLEWPTNP
QAHPYFWQCLKNALATDNHVTYSQVFKETA
Download sequence
Identical sequences A3RLM8 A5JVA0
ENSSSCP00000012898 ENSSSCP00000028903 ENSSSCP00000012898

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