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Domain assignment for ENSSSCP00000030722 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000030722
Domain Number 1 Region: 638-783
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 4.19e-46
Family Toll/Interleukin receptor TIR domain 0.0000000926
Further Details:      
 
Domain Number 2 Region: 46-167,355-558
Classification Level Classification E-value
Superfamily RNI-like 1.41e-41
Family Cyclin A/CDK2-associated p19, Skp2 0.079
Further Details:      
 
Domain Number 3 Region: 145-235
Classification Level Classification E-value
Superfamily L domain-like 0.00000000151
Family Ngr ectodomain-like 0.052
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000030722
Domain Number - Region: 596-648
Classification Level Classification E-value
Superfamily Fumarate reductase respiratory complex transmembrane subunits 0.00201
Family Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) 0.074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000030722   Gene: ENSSSCG00000009002   Transcript: ENSSSCT00000033729
Sequence length 785
Comment pep:known chromosome:Sscrofa10.2:8:79824541:79833729:-1 gene:ENSSSCG00000009002 transcript:ENSSSCT00000033729 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPCALWTAWVLGIVISLSKEGAPHQASSLSCDPAGVCDGRSRSLSSIPSGLTAAVKSLDL
SNNRIAYVGSSDLRKCVNLRALRLGANSIHTVEEDSFSSLGSLEHLDLSYNHLSNLSSSW
FKSLSTLKFLNLLGNPYKTLGETPLFSHLPNLRILKIGNNDTFAEIQAKDFQGLTFLQEL
EIGASHLQRYAPKSLRSIQNISHLILHMRRPALLPKIFVDLLSSLEYLELRNTDFSTFNF
SDVSINEPSTVMKKFTFRKAEITDASFTEIVKLLNYVSGALEVEFDDCTLNGRGDFSTSA
LDTIKSLGNVETLTVRRLHIPQFFLFYDLRSIYSLTGAVKRITIENSKVFLVPCSLSQHL
KSLEYLDLSENLMSEEYLKNSACEHAWPFLHTLILRQNHLKSLEKTGEVLVTLKNLTNLD
ISKNNFDSMPETCQWPEKMKYLNLSSTRIHSLTHCLPQTLEVLDISNNNLNSFSLSLPQL
KELYISRNKLKTLPDASFLPMLSVLRISRNTINTFSKEQLDSFQKLKTLEAGGNNFICSC
DFLSFTQGQQALAQVLSDWPENYLCDSPSHVRGQRVQDTRLSLTECHRVAVVSVVCCALF
LLLLLTGALCHHFHGLWYMKMMWAWLQAKRKPRKAPRRDVCYDAFVSYSEQDSYWVENLM
VQELEHFQPPFKLCLHKRDFIPGKWIIDNIIDSIEKSQKTIFVLSENFVKSEWCKYELDF
SHFRLFDENDDTAILILLEPIEKKAIPQRFCKLRKIMNTRTYLEWPADETQREGFWLNLR
AAIKS
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Identical sequences Q59HI8
ENSSSCP00000009606 9823.ENSSSCP00000009606 XP_005653633.1.46622 XP_005653634.1.46622 XP_005653635.1.46622 XP_005653636.1.46622 ENSSSCP00000009606 ENSSSCP00000030722

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