SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000000818 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000000818
Domain Number 1 Region: 389-625
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.33e-36
Family Calponin-homology domain, CH-domain 0.0000884
Further Details:      
 
Domain Number 2 Region: 86-241,387-436
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 2.2e-16
Family FAD/NAD-linked reductases, N-terminal and central domains 0.058
Further Details:      
 
Domain Number 3 Region: 757-790
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000143
Family LIM domain 0.014
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000000818
Domain Number - Region: 791-819
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000913
Family LIM domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000000818   Gene: ENSSSCG00000000770   Transcript: ENSSSCT00000000834
Sequence length 1949
Comment pep:known_by_projection chromosome:Sscrofa10.2:5:72159023:72254310:-1 gene:ENSSSCG00000000770 transcript:ENSSSCT00000000834 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEESKNEATNRAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDHRSFYHKLKSKLNYW
RAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA
FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN
VEFQGLVQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK
LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV
MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLNYAREAADFSTQQQLPSLDFAINH
YGQPDVAMFDFTCMYASENAALVREHNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD
SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNVNVNFLR
PSQVRHLYDTGESKDIHLEMENLVNSRTTPKLARNESVARSSKLLGWCQRQTDGYAGVNV
TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE
MASVGEPDKLSMVMYLTQFYEMFRDSLPSRDALELNAEERAILIASTKSPISFSKLGQTI
SRKRSPKVRGRVFSPAGKQMARSRPHIHVQEDAPRGYRGGRPTLVSTLTDRRMDVALGNQ
NKVKYMATQLLAKFEENAPPQSTGVRRQGSIKKEFPQNLGGSDTCYFCQKRVYVMERLSA
EGKFFHRSCFKCEYCATTLRLSAYAYDLEDGKFYCKPHYCYRLSGSAQRKRPAVAPLSGK
ETRGLLQDGPTADTNGRSSSSASPAERTPGSSVNGLEEPSIAKRLRGTPERIELENYRLS
VRQAEGLEEVPEETQAEHNLSSVLDTGTEEDAASSSSESEMEEEEEEEEPPLPASDLGGV
PWKEAVRIHALLKGKSEEELEASGSFEPGDEDDEDEEDEEEEEEEEDESSEAGNQRLLQS
IGAADPLEIQADVHWTHIRENEQERAAPASESSPSRVPFDEEDLEDDEDSEPAEIEGEAA
ENGDTGDTGAELEDDQHWSDDAPSEADTVRQQAVTGAGLELRVSEGKEEPPPTLARRQGR
GPSQVSSPTRSPEKQVVLSSPAHSPEAQGTRAPLPSAATTLGSPTESSVPEPPPPHGEPT
TGPPVRSQPEARTPPSPTSPPHRTPLVPLPICSQPQPSSEATVPSPTMSPIRFQPTPART
STPLAPLPTKNQGDAKDTLGSPLAVDEALKRSDLVAEFWMKSAEIRRSLGLKPVHRSPGP
EPGFQPTSLKAYPAERSPQGEGLRLLKPPPIPKRLGLPIAEGAQPSLPTPGSPPDRELKS
PREEHRDLSSSSGLGLQASSSRTRTPGSQSFNTSDSTMLTPPSSPPPPPPDEEPATLPRE
PTAPAPPPPPPPAACTRSPREEARKSFVESVDEIPFADDVEDTYDDRTEDSSLQEPFFTP
PSHWSRLEQPPRPPLAQENGRGPVAESGVQPQKRGLPLVSAEAKELATERMRAREKSVRS
QALRDAMARQLSRMKELDTAAPTPRTPAPRRAAAAPPKGRGPGPQGSEEPTLRHEATSEE
VLSPPSDSGGPDGSVTSSEGSSGKSKKRSSLFSPRRNKKEKKPKGEGRPPERPSPLEGTA
AKPRSLWKSVFSGYRRDRRKKGDGTSCPSTPSSGGTIDASKPGASAVVRAELRPRRQLSC
SEDSDLSSDDVLERASQKSRREPRTYTEEELNAKLTRRVQKAARRQAKQEELKRLHRAQI
IQRQLEQVEEKQRQLEERGVAVEKALRGEAGMGKQDDPKLMQEWFKLVQEKNAMVRYESE
LMIFARELELEDRQSRLQQELRERMAVEDHLKTEEELSEEKRILNEMLDVVEQRDALVAL
LEEQRLREKEEDRDLEAAMLSKGFSLNWS
Download sequence
Identical sequences ENSSSCP00000000818 ENSSSCP00000000818

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]