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Domain assignment for ENSSSCP00000001285 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000001285
Domain Number 1 Region: 47-139
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 5.49e-40
Family SCAN domain 0.0000313
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000001285   Gene: ENSSSCG00000001216   Transcript: ENSSSCT00000001314
Sequence length 142
Comment pep:novel chromosome:Sscrofa10.2:7:24276047:24276472:-1 gene:ENSSSCG00000001216 transcript:ENSSSCT00000001314 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LRMAAAPRALSALAGQASEEQGEIIKVKVKEEDHIWDQESCIQKNLSHTRELSRQRFRQL
CYQETPGPREALSQLRELCRQWLSPEIHTKEQILELLVLEQLLTILPEELQAWVREHHPE
SGEEVVTVLEDLERELDEPRQQ
Download sequence
Identical sequences ENSSSCP00000001285 ENSSSCP00000001285 9823.ENSSSCP00000001285

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