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Domain assignment for ENSSSCP00000004302 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000004302
Domain Number 1 Region: 277-334
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.46e-25
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 2 Region: 333-390
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.35e-23
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 3 Region: 68-131
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.57e-21
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 4 Region: 417-474
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.35e-21
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 5 Region: 459-511
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.24e-18
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 6 Region: 380-412
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000473
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 7 Region: 239-291
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000215
Family Classic zinc finger, C2H2 0.023
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000004302
Domain Number - Region: 2-40
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 0.00215
Family SCAN domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000004302   Gene: ENSSSCG00000003981   Transcript: ENSSSCT00000004403
Sequence length 524
Comment pep:novel chromosome:Sscrofa10.2:6:157618570:157634184:-1 gene:ENSSSCG00000003981 transcript:ENSSSCT00000004403 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLQQLLITLPAEASTWVKLCHPEKATEGAPLWEDVTKMLEGEALLSQDANETQGKSLKVE
VTPRDPTAEPQEQLTFRDVSVDFTQEEWGQLAPAHRHLYREVMLENYGNLVSVARYQLSK
PSVISQLEKGEEPWMTEKEGPGDPSSGLTSKTETSVSTAENDIVQEQLYHSMMMERLMRD
DVIYSTLREVSKYDYELERQQDSCGRDMRQTIWTHKKRGQETSKFGRSITSSNIVIEQRH
HKCDMPKKRNKYKSNLINHPMSYIRTKTYECNICEKVFKQPIHLTEHMRIHTGEKPFRCK
ECGRAFSQSASLNTHQRIHTGEKPFECEECGKAFRHRSSLNQHHRTHTGEKPYVCDKCQK
AFSQNISLIQHLRTHSGEKPFTCNECGKTFRQIRHLSEHVRIHTGEKPYACTACCKTFSH
RAYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECKRCGKAYRHDSSF
KKHQRHHTGEKPYECNECGKAFSYNSSLTRHHEIHRRNAFQDNM
Download sequence
Identical sequences F1SCQ7
XP_005665581.1.46622 XP_013832839.1.46622 XP_013832840.1.46622 ENSSSCP00000004302 ENSSSCP00000004302

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