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Domain assignment for ENSSSCP00000016322 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000016322
Domain Number 1 Region: 15-76
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 0.00000644
Family L-arabinose binding protein-like 0.0052
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000016322
Domain Number - Region: 72-115
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0115
Family TNF receptor-like 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000016322   Gene: ENSSSCG00000015395   Transcript: ENSSSCT00000016770
Sequence length 445
Comment pep:known chromosome:Sscrofa10.2:9:103209660:103237238:-1 gene:ENSSSCG00000015395 transcript:ENSSSCT00000016770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CQVLHVTAPFITNKGADSVVKFDTFGDGMGQYNVFNFQYVGGKYSYLKVGHWAETLSLDV
NSIHWSRNSIPTSQCSDPCAPNEMKNMQPGDVCCWICIPCEPYEYLADEFTCMDCGLGQW
PNADLSGCFDLPEDYIRWEDAWAIGPVTIACLGFMCTCMVVTVFIKHNNTPLVKASGREL
CYILLFGVGLSYCMTFFFISKPSPVICALRRLGLGTSFAVCYSALLTKTNCIARIFDGVK
NGAQRPKFISPSSQVFICLGLILVQIVVVSVWLILEAPGTRRYTLPEKRETVILKCNVKD
SSMLISLTYDVVLVILCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSS
DYRVQTTTMCISVSLSGFVVLGCLFAPKVHIILFQPQKNVVTHRLHLNRFSVSGTGTTYS
QSSASTYMPTVCNGREVLDSTTSSL
Download sequence
Identical sequences ENSSSCP00000016322 ENSSSCP00000016322

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