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Domain assignment for ENSSSCP00000019587 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000019587
Domain Number 1 Region: 339-439
Classification Level Classification E-value
Superfamily Virus ectodomain 1.19e-18
Family Virus ectodomain 0.0049
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000019587
Domain Number - Region: 3-111
Classification Level Classification E-value
Superfamily ENV polyprotein, receptor-binding domain 0.0366
Family ENV polyprotein, receptor-binding domain 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000019587   Gene: ENSSSCG00000027616   Transcript: ENSSSCT00000028227
Sequence length 526
Comment pep:novel chromosome:Sscrofa10.2:10:47620495:47622126:1 gene:ENSSSCG00000027616 transcript:ENSSSCT00000028227 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VSILFDACEAMNGSWTSTRPCGSPSWEREYRLQHKYMCWGTTWSSCQECTSWSCVAWATW
NKGDKTFQKGIAPPDCQTSPINFTIFNSSEPKWKEGFKISIHIDGRGLDPGENHVCPLAL
QAASHRVFHSFYEEIRNTPPPIPATTKNLFLALAETTAQTLKVSSCYVRRGTNTGDHWPW
PARELDPLEPHDCIPQLTNGVWLLRTAIIGRNCLARRGGRFNVSVGSLTCLGLRYYNLTA
QKTQWWSSSNRSEPTSDSANIQWRAPKGSYIGFMEKTAYSILPPNWAGACVLETIRPSFF
LLPLSLGQQLGVPIYGAQRDWMALQIGDWKDDEWPLERIIQYFGPATWAEDGSWEYRTPI
YMLNHIIRLQAVLELITNDTARALTILAQQQTKMYSAIYQNHLALDYLLLKEGFVENLSN
CCLQIDDTREVIEEIADCMTKLAHVPVQTWKGWDADSLFGKWFSWLGGIKTMVGIIMVIF
AGCLLIPCLVPLLINIIKGFIRTMVEGKTASHLLFIRGYQRVMTDD
Download sequence
Identical sequences ENSSSCP00000019587

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