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  Home > Genomes > Sarcoptes scabiei > SSCA004528-PA

Domain assignment for SSCA004528-PA from Sarcoptes scabiei

Domain architecture

Domain assignment details

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Strong hits

Sequence:  SSCA004528-PA
Domain Number 1 Region: 267-383
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 8.5e-26
Family Spermadhesin, CUB domain 0.00055
Further Details:      
 
Domain Number 2 Region: 786-945
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.4e-25
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.0034
Further Details:      
 
Domain Number 3 Region: 151-262
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.49e-22
Family Spermadhesin, CUB domain 0.0011
Further Details:      
 
Domain Number 4 Region: 1261-1409
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 3.17e-22
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.0033
Further Details:      
 
Domain Number 5 Region: 2542-2755
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.06e-20
Family Laminin G-like module 0.021
Further Details:      
 
Domain Number 6 Region: 1014-1078
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000347
Family Complement control module/SCR domain 0.0012
Further Details:      
 
Domain Number 7 Region: 625-697
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000005
Family Complement control module/SCR domain 0.0024
Further Details:      
 
Domain Number 8 Region: 384-504
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000000000536
Family Spermadhesin, CUB domain 0.0013
Further Details:      
 
Domain Number 9 Region: 3119-3258
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000345
Family Growth factor receptor domain 0.0063
Further Details:      
 
Domain Number 10 Region: 1793-1967
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000393
Family Growth factor receptor domain 0.0083
Further Details:      
 
Domain Number 11 Region: 2035-2078
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000013
Family EGF-type module 0.0056
Further Details:      
 
Domain Number 12 Region: 2294-2426
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000033
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 13 Region: 681-746
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000106
Family Complement control module/SCR domain 0.0012
Further Details:      
 
Domain Number 14 Region: 108-148
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000128
Family LDL receptor-like module 0.00088
Further Details:      
 
Domain Number 15 Region: 2180-2310
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000251
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 16 Region: 2150-2193
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000255
Family EGF-type module 0.0087
Further Details:      
 
Domain Number 17 Region: 2457-2536,3095-3144
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000392
Family Growth factor receptor domain 0.0079
Further Details:      
 
Domain Number 18 Region: 564-627
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000723
Family Complement control module/SCR domain 0.0025
Further Details:      
 
Domain Number 19 Region: 2000-2041
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000739
Family EGF-type module 0.013
Further Details:      
 
Domain Number 20 Region: 2114-2158
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000015
Family EGF-type module 0.014
Further Details:      
 
Domain Number 21 Region: 3380-3420
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000282
Family EGF-type module 0.015
Further Details:      
 
Domain Number 22 Region: 949-984
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000341
Family EGF-type module 0.015
Further Details:      
 
Domain Number 23 Region: 502-574
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000625
Family Complement control module/SCR domain 0.0018
Further Details:      
 
Domain Number 24 Region: 2419-2460
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000643
Family EGF-type module 0.022
Further Details:      
 
Domain Number 25 Region: 3-111
Classification Level Classification E-value
Superfamily C-type lectin-like 0.00000165
Family C-type lectin domain 0.011
Further Details:      
 
Domain Number 26 Region: 744-791
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000594
Family EGF-type module 0.011
Further Details:      
 
Domain Number 27 Region: 2072-2117
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000193
Family EGF-type module 0.011
Further Details:      
 
Domain Number 28 Region: 1150-1217
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000236
Family Complement control module/SCR domain 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SSCA004528-PA
Sequence length 3576
Comment pep supercontig:SscaA1:JXLN01009873:25058:36688:-1 gene:SSCA004528 transcript:SSCA004528-RA gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MMYGSELVLISDFTQNNFTAALAEASLREAGNGVRSYWIGFESIDQLSTNTIESASGRFV
SKYVGFWAYDQPNVDDGQCVRATVVGEHDSNGGSPYNVWSLAECEDLLPFITCPTDSYHC
SNGKCINNAWKCDGDDDCEDRSDEMDCPRKCSYYLQSSGDKVISPNYPNKYEPNSDCKWT
LEGPIGSGMVLQFSEFDTENNFDQIQILVGGRTEETSTTLATLSGIQNISSRSFTTGSNL
MIIKFRSDATVEKRGFRASWKTEPLKCGGEFIAQTITQSISSPQYPNHYPGGLECVYVIQ
ANQGKTITLEIVELDLEPENDFILIRDGLNSKSPPLGRFTGNLTSSLKESHERYVVSTGN
TLYIYFHSNFGVHFRKGFEIRYKAGCEINLIADKGLVTSPAFGVTNYPTNQNCFYHISRR
NPSDGSVSIVFDEFGVTNEDILQIYDGQDSLIGVPLHPSRGFGTKTKPTGLTLTASSGQM
LLIFKTNALKAAKGWSANFSADCSPLKIGRNAIASERGSMFGSKVVFTCPVGQEFSTGVS
RLETECLMGGQWSLDTIPNCQERYCGPVPQIDNGFAVDATNVTYRGIANYQCYAGFAFPS
NLRTESIRCGEDGKWGKLPICLASSCPPIPETPHAVQTIMAGSVNRSYGTIIRFECESGY
HRRGVPVVVCTSIGQWSGLPPMCERAKCPMIPEIKNGYLSNSDQNREYYFEDESRVFCNR
GYRLEGSSIIKCSSNQSFSGVPSCVDIDECSPGNSACDLASTVCTNTDGGHFCKCKEGFE
PNLNCRPVSDLGLTSGAIPDSSIRVSSTEPGYRKSDIRLDTLPRNTHNGWCGASPRIGEN
WVQVDLKAPVVIRSIRIQSVQRLDGSQAYPITIRLQYADDLTDLFRDYSDLSGRPLQFRL
TPNGGSGLSIVNFPIPLEARYIRVLIIEFAVAPCMRFELMGCTRQDCIDINECMENGGCD
HKCINSPGGFSCQCNVGYELYTSNGTAGFFIPPNETGLRDGDVYRINKTCVPKQCPTLNS
PENGKILNLQDKFHYNDVINFNCDFGYVLQGQRTLLCGSNGVWNGTTPKCLYAQCPVLAD
DPSQGLKLRYESIENNLIPFLSNINVTCNEDGRPNKRTANSHHRQCNYNPKEGHPDFWIA
GKMPTCPKIDCGEPPESNGASYGYYMDTYYKSSFFFGCENTFTLAGKTNRNDNVVRCSDK
GYWDFGDLRCEGPVCMDPGHPADGQQIATSYEHNSQVRFSCDRPGYVPYTPDPISCVKNA
DCKIIKPIGLSTGLIPDSSINATTQRTNYEATKVRLNSATGWCGQHEPFTYVTVDLKKVY
KIKTLLVKGVVTNDVIGRPTELRFFYKVRESENFVVYFPNFNLTFNEMGNYGELTVINLP
ATVVARYIILGIVAYQKNPCLKFELLGCEDKKEEILLGYDRGHPMCVDQEPPKFQNCPTA
PIVVKKGPSGLLPVNFSIPVAVDNSGFVARVETHPIGFKPPMVVLEDTQVEYIAYDMDGN
VASCKINITVPETTPPMLHCPQSYVIELIEEQESYEINFNQTRKLINATDESGEVQITLN
PEIDFIPVKGYRNVTVTATDRFGNEAYCHFQVSVQPASCVPWSLTKPANGAIICRRTDSG
YKCMAKCNDRYRFVDADSVKIYECKEGEHWQPNNLVPDCVPEPEKEMDDSNYDVVANIEY
RSGGFAPPSCMSAYVNYVSSYYDDLNHLLSARCSAINVDMAVHFFNTTISLKPNTNELSI
KYVLRVQPKFRQKTLYDLCGSTLTLIFDLMVPSTYAVIEPLLNISTQQVGGSCPSLIALR
SSVNRGFTCRPGEILSPLNATEDKSGFKIPRCLQCPAGTYASSNTNLCLPCPLGWYQDLL
RQPSCRQCPEGTYTRSEGSKSVSECVPVCGYGTYSPTGMVPCLQCPVNTYSGSPSKEGFK
ECQRCLTNTFTYGPGAMSINECKVKCPPGTYSETGLEPCAPCPMNYYQDKEGQTQCIECR
LRERTLRLGERKKEACVQGQCSSIQCQNGGLCIVNRHEPYCYCPAGFTGQSCEIDMNECS
SEPCYNGGTCIDHPQGYTCRCPPGFSGLQCQTEQDECLPDSCPEKAMCQNLPGIGNLNCL
CRSGYEGHNCNVTVNPCSNNPSPCENDGICVPLLQGRYYCQCPAGWTGNHCQTNIDDCED
EPCLLGSRCTDLVNDFQCDCPPGFSGKRCEEKIDLCASDPCIHGMCVDRLFYHECVCEPG
WNGTRCENNIDDCASSPCRNDAECVDLIDGFRCVCDPNSYTGSRCQHEIDSCESDPCQNG
GTCLDQHIGFQCQCKPGFVGLQCEAEVDECVSNPCSPLGTEKCIDLDNTFKCQCHEGFTG
ELCETNVDECASSPCFNGGTCVDQINNFRCNCPLGWNGPRCEKDVGMCDSSPCHNNAKCV
DLFQDYFCVCPSGTDGKRCQTAPQRCIGDPCQNNGICQDFGSGLNCSCPPKYTGIGCQYE
YHVCDSQKCQNGATCQDNQDGTYECICPSGFTGKNCEEDIIDCLPTSCPPSATCIDLTNG
FYCKCPFNMTGEDCRKPINIEYDLFFNDRTRSSNAALTVPFSLEESDSFTIALWVQFHPE
SIGTYFTLYEVDSLYVLNNKQRPLVQANHLGVLISLFNENGFKSKRSPDIFMPYLENVPI
NDGQWHYINIIWDGREGTLMLVTDTAVANTVQDYGLGGRLPPFGWVVLGAPVENSVPHLG
EGFHGRLSRVNIWKRPLDMSVEIPSQIRSCKNSPIIYSGLLLRWTGYDSILGTVEKVGPG
KCGERICPNGYTGDDCRILQQDKTPPQVLHCPPDMWVISANTSTIVHWDEPQFVDDLRNV
QVLEVQKIKPGESLKKGIYDLTFLALDEVGNSARCDFQIHVLREFCKIPDPPVNGQRDCS
DWGPGGRFKVCQIKCNPGLHFSEPVPNFYVCGAEGFWRPKSPDQNPESPLVFPTCSPKYS
AQRIFRMIMNFPSSVVCSESGKKILTGRAHDSIIRVDRSWKICSDNVRGSCKGLTINVKC
IKGLQNNNIVKRSLISDSSEEENQQDIYSLEVSFPANNDPIPASSNPNIMVGQDKDSLEA
IIRRAVVESAIFDVRDTLPNVAADLTSLNLITEYACPPGQVVIGNNCVECGLGTYFDELT
GRCVKCPVGFYQEELGQLQCKNCPIIGERQGVTIIKGSRHPSECRESCSAGEYYDMETST
CQSCGYGFYQPSEGSFTCIPCGPGLTTRSPKAISQKECRPECMAGFQLSSTGNCEACPLG
YYRTRGQPSCEPCPKGFTTGSIAAINVGQCNLEICIAGHFLNVTTEECQLCPKGTYQDVE
QRDTSCQSCPPNSTTSGIGSTSSDQCSNPCLINDKIELCPPNSQCEAPSIGSEDFRCVCK
EGFKEAPHPDGQTTTANNPYCIDVCDNYCINGGKCEWKSGMKKPRCECLINFYGDRCERK
SELIYIASGIGAAVFFIIFMVLLIWMICVRTASRPMSKKLSMHTIPADFGPTAGSQQNFY
YGAPAPYAESIAPSHHSTYAHYYDDEDDGWEMPNFYNETYMKESLHNSKSNNGTLQGINN
PSIYSTNKEDLYDRLRKHQYMGKKGDSNSESEDPVN
Download sequence
Identical sequences A0A132A0S4
SSCA004528-PA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.