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Domain assignment for symbB.v1.2.037266.t1|scaffold5456.1|size26954|1 from Symbiodinium minutum clade B1 v1.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  symbB.v1.2.037266.t1|scaffold5456.1|size26954|1
Domain Number 1 Region: 1407-1649
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 0.00000000133
Family Reverse transcriptase 0.018
Further Details:      
 
Weak hits

Sequence:  symbB.v1.2.037266.t1|scaffold5456.1|size26954|1
Domain Number - Region: 442-639
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 0.0318
Family Lambda integrase-like, catalytic core 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) symbB.v1.2.037266.t1|scaffold5456.1|size26954|1
Sequence length 1839
Sequence
MFAVLDEDGSWWYTDCAAKEESADAPQDGAEDENSGVLVLNCVLPQLDSLVVGDSLRHDC
CSSDASSGADEQFDSDASLDANEESFDVDRLFDGVLHFDMAHDDFDEFEEKSPIREVTEL
EAVYNRNWTTADWGDSRDVESSLRQTLXKEYKIPEDEPEVMSGGHLKALTADELEGLDES
DKQSFKFLVIKEVFSSSIGAVVVSDEKGGEQQLISKWFGEFGLRNSAEEASVVLLTDSES
AVSSMVANIQGYQFLVQKAPPQAHESVGHAERAIRGVKEAVKMQLLESERRSSKGSVVVV
EEAAVESPDSPVDDKSVSEYVPTELGGDDDTGLSVGDEIETLDADASMRGSIKRFSDTPI
TQLESEIGGSSHEKRKVSGLVSGLIEDNNAAPSTGQAFIESVNFLSHLVGFVAFDASTLL
SPRVKGVVHSMLILKKPLNQARPLTKQEVAALEDAVLFPESEVLAVMSGFFLFCTLNCCR
FTDAQYAERMELDDSGDIFVLHSGTRRHKTATTADKKTTLLPLVCLGHAFRNKSWAADWL
LMVEAQGWPETQEFFLPAYCEQTGRWSTRRMTSGEGSLWLRECLESQGIDVLDNPKLPTT
HSCKTTLLSWMAKAGSFSISERQVMGHHLDRPSTSALTYGRQNFIPILVRIAALLKRIKE
GNFIHDAKASKMISLAIAQMEEESEAHQRHIEGPINVAAEDSASEVDDNEDLEIAIGQVV
PDDERRTTGLTGPERFEQHRLSGTSSAMAVDSAASFKARMEALGLPATHVAAFERRNVST
YAAFAFICPYQPTGNDEKPFTDALEDILGGPPGDYLPVYRRLFYEAHTLAVQDLRSRLES
RDGQEPRKLAMPERMERLNQLRASLTGLTLDSQLEPSHALVDRVVAMAEDQSIHYLDLSV
CTSRETEVNMLKKEPVLEFGNDGALRISKKQKEAVADTTGELRVRLCMQRRALAFQLANV
ATFVVLDSFISKLFAPMTRKPIGGYRSISLTQVIAADQALWQLVSQETRGQVLTSGDPRP
IDKAVKDFMDAPEVSYHLLPMRDSHKPDNDHKEKKEKKENKRKHDAKPLSTCPPGLKRGV
DEEKVGELDIKLAEALEEQYAKLPGTVVRHLATDNPGDIKWYGVHRNHLQAFQATLQLQH
PMDMQVPIPDILQEAMFNVLTMGAAKTLEMRALQCKRILRLVSDLDADEKKLHEGMPKDV
QSVLRGKRILLWKRLLEETNFPDLRIVDEVVDRLKLVGSSTKSGAFPSGVYPAQQTVEQL
SQQSIWRRKSSIGKCRPTDDAEADDELWAQSLKEAEQGWLSGPFSSEREVTEALKTDNWI
CTRRFPLRQSNKIRLIDDGLESGLNSAYSSFNKLKLMDMDSVVAMVQLLLQSIHGKGRFC
FRLSDGRLLEGMVHSDWRRNPKLLGRTLDLTAAYKQLAVDPKQSLIRALVAYNPENKALA
FFIFNALPFGATGSVYGFNRVAKSLWHIMVTLGNVFATQYYDDYPNVEFSSLARSSQNFM
EFILQALGWKFATDGKKACPPESSFKVLGVELDLSQTDRGTLIVANKQDRIENLTAFLAG
LMKRGRITGSEAATLHGQLNFAQGQYYGCSMKPAMSFLQTVMRTSWKSSYSQDLVVMCTY
LVTSLLTCPPRVISTTDSKQPVILFTDGAFEVEDGVGIGSAGLVLFDPLTNVKEVAEVDV
PQSLISHWGRGGSKQLIAFLELWPVLLGIITYGPHIRGRRLLVFIDNNGVRDALIKGSSP
LIDLFTMLSLCSLAVSVNGLSVWFTRIPSSSNPSDDPSRGEPERVAKLLGANLRHPISAS
EGIIESLLSKSDFVKFMQGAAHDSSLVQPNENGGGARLQ
Download sequence
Identical sequences symbB.v1.2.037266.t1|scaffold5456.1|size26954|1

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