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Domain assignment for Sopim03g113630.0.1 from Solanum pimpinellifolium A-1.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Sopim03g113630.0.1
Domain Number 1 Region: 113-200,310-411
Classification Level Classification E-value
Superfamily HCP-like 0.00000759
Family HCP-like 0.033
Further Details:      
 
Weak hits

Sequence:  Sopim03g113630.0.1
Domain Number - Region: 467-555,591-690
Classification Level Classification E-value
Superfamily TPR-like 0.0948
Family Tetratricopeptide repeat (TPR) 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Sopim03g113630.0.1
Sequence length 860
Sequence
MSLSYNTFSQVLTPVPPSHRYLFPAKIPNYYKLPGLHRRLLLTVAVRAKPKDLILGNPTV
TVEKGKYSYDVETLINKLSSLPPRGSIARCLDTFKNKLSLTDFSLVFKEFAARGDWQRSL
RLFKYMQRQIWCKPNEHIYTLMIGILGREGLLDKAFEIFDEMSTHNVARTVFSYTAIINS
YGRNGQYETSLQLLEKMKQENIVPSILTYNTVINSCARGGYEWEGLLGLFAEMRHEGIQP
DLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTYSYLVETFGKLGKLEKVSELL
MEMEAGGTSPEVTSYNVLLEAYAHLGSMKEAMDVFRQMQAAGCVANAETYSILLNLYGKN
GRYDQVRELFLEMKTSNTEPDADTYNILIQVFGEGGYFKEVVTLFHDMVEEKVEPNMETY
EGLIYACGKGGLHEDAKRILLHMNGQGLVPSSKVYTAVIEAYGQAALYEEAVVAFNTMNE
VGSRPVVETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRDSFNGMIEGYRQGGQFEE
AIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESEEQFQEIKSLGIQPSIICCCMMLA
IYAKSERWDMARELLNDVMTNKTSDMHQIIGRMIHGDFDDENNWQMVEYVFDKLKSEGCG
LSMRFYNTLIEALWWLGQKERAARVLNEATKRGLFPELFRRNKLVWSVDVHRMWPGGACT
AISIWLNDMEELFHKGEELPQLASIVVVRGQTEKSSVTRDLPVAKAAYSFLKDTISSSFS
FPGWNKGRIVCQKTQLKRTFSSAEPSVEASKGDRLIPLSNSLISLLGTQTSMSVAKRSES
VNADSERSTRPDPELMTSSV
Download sequence
Identical sequences K4BKL5
Solyc03g113630.2.1 XP_004236160.1.44838 Sopim03g113630.0.1 Solyc03g113630.2.1

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