SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sopim03g120280.0.1 from Solanum pimpinellifolium A-1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sopim03g120280.0.1
Domain Number 1 Region: 311-434
Classification Level Classification E-value
Superfamily PH domain-like 1.07e-28
Family Ran-binding domain 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Sopim03g120280.0.1
Sequence length 449
Sequence
MGDAENSLQPSKKRAAIKELSRDNPGLDDDENEAELETGSFKKASEEVMASRRIVKVRRS
QTTSSTATPSANPFAAIRLVPPTESSIPSTVITSEVESGITSSGKPEDKNDIGEATRKET
NDVCKEELKESDQISKPSEGNVDESNVVKEKVETPNEADKPESAEEKVADDEKVQAETKE
GTVVEKSENDSKKDVEVEKTKNEEQNDAGGEKSEKGAETASFSSFQQLSSGQNAFTGFSG
TGFSSTTFSFGGISKEGSSLGFGSESGAGSLFGAKSDQSPFGLNLPTNGSTSLFGNSGSS
LVNKSEGTGFPSKEEVTVETGEENEKPVFAADSVLFEYLNGGWKERGKGELKVNVSTTGE
GKGRLVMRTKGNYRLILNASLFPEMKLANMDKRGVTFACLNSAADGKGLSTIALKFKDAS
IVEDFRAAVVEHKGTTTGSLKTPENSPKA
Download sequence
Identical sequences K4BMH7
Solyc03g120280.1.1 Solyc03g120280.1.1 XP_004235706.1.44838 Sopim03g120280.0.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]