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Domain assignment for YOR166C from Saccharomyces cerevisiae W303

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YOR166C
Domain Number 1 Region: 132-181,226-275
Classification Level Classification E-value
Superfamily PIN domain-like 0.0000000000235
Family PIN domain 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) YOR166C
Sequence length 458
Comment SWT1 ORF Verified RNA endoribonuclease involved in perinuclear mRNP quality control via the turnover of aberrant, unprocessed pre-mRNAs; interacts with subunits of THO/TREX, TREX-2, and RNA polymerase II; contains a PIN (PilT N terminus) domain
Sequence
MTDEKRAFPKGNNHIRSETFNGSVSHKISESIKDIASLRPHGKYTVQDIDNIIASTSSHE
NRGQSGDSNGCINHDEEGDIPMCDLNDESDVEMISEYLSSQREMEAQSVANYMPKINDDL
PLLNPPTLKTAFVVDTNFIISHLNTLEKLRSLSSTYHHLIIVPTTVIQELDGLKKSPDIA
RDNDDTTNQEHDRTIGTLARWGNDWIYKNLANLDSGLIGQKLKQSLNPGSLKDDSILDCC
LYFKEILNCFVILLSNDKNLCTKALTEDILTVSFRKNMDAKIIAMRAYEENQLRFANLRD
STVNNFDQNVTSYAHIPGIETPPLQFDKVSQNVFEQVKETIFFAIDHTLRKEYGEDIGFI
DYNPDKLTTIENASNYIYLFWVSVFSELFTCSKIKKNEWKSLPTVLKSKPTNLNDLRTFE
QFWETVLHFLFSKFTNEEKQSLEKQIHEWKTSINAIST
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Identical sequences A0A0L8VH91 A6ZP11 B3LJJ9 C7GN58 C8ZGS7 E7KUG7 E7M0F9 E7QKT5 H0GNJ3 N1NWP8 Q12104
YOR166C YOR166C YOR166C YOR166C SCRT_01559 YOR166C NP_014809.3.97178 tr|A6ZP11|A6ZP11_YEAS7 YOR166C YOR166C YOR166C YOR166C YOR166C YOR166C 4932.YOR166C YOR166C YOR166C YOR166C

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