SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427724088|ref|YP_007071365.1| from Leptolyngbya sp. PCC 7376

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427724088|ref|YP_007071365.1|
Domain Number 1 Region: 32-280,329-349
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.69e-36
Family Filamentous hemagglutinin FhaB, secretion domain 0.01
Further Details:      
 
Domain Number 2 Region: 351-502,541-570
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000267
Family Filamentous hemagglutinin FhaB, secretion domain 0.048
Further Details:      
 
Weak hits

Sequence:  gi|427724088|ref|YP_007071365.1|
Domain Number - Region: 810-865,903-928
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00207
Family Filamentous hemagglutinin FhaB, secretion domain 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427724088|ref|YP_007071365.1|
Sequence length 1260
Comment filamentous hemagglutinin family outer membrane protein [Leptolyngbya sp. PCC 7376]
Sequence
MTHQFSHTTKSLFHWNALVVGAASTIMFGASSSQAQLLPDTSLGIESSTISAGDVIHGGA
TRGSNLFHSFSDFNVNAGQAVYFANPTGIENILSRITGRNVSNIDGLLGVDGTANLFLLN
PNGIIFGENARLDISGSFTASTGNSFTFTDGSEFSATPTAGELLTMNVPLGVQFNDRPQG
NLTNEANLTVGNGSTLTLFGRDVVNSGNLTALGGTVEILGDRVALTDQANIDVSSPIGNG
QVFIGGNYQGIGSLPNAISTFVGNDVVINANALTDGDGGQVIVWADEDTRFLGKINSKGG
VISGNGGLVEVSGKQQLDFRGDVDTSAVAGSSGTLLLDPENITIVDGNSLPANVADGLWD
FSEDPGDQTIGAGAIATLLLSNALTLQAIDTITVDSAVNTGSSNSLTLEASNIILNEVIT
SPLGGDVNLITPQSDSNRVLINSSSGINNDVSTNVNGGDIQITTHDLTIQNGGILFAGTV
ADGGDSGRITINASGNVLVTEGAVIDSRVLSGVGRSRGIEIVANTFTAENSSMITTSSSG
NGDAGNITFRVAELNLLNNAAISASTTGGGKGGVIRIEFSEQLFVDGGKITASTENVADG
GSIEIIGIEPTGSGTNNDKIVTITNDGMLSASSTSDGAAGNITFQVAELNLLNNGLIEAS
TTGRGKGGVIRIEFSQKLLIDSGRITTSANGVGEAGEGGSILILEIEPEPTKSGISNDRT
VTITNGGVLSVFTAGSGDGGDIDIQVSELNITGGGITAATGGSGESGSIGIQASKLNITS
GGIGLSTDGTGDGGLLEIIVSELNLADSSRIEASTTGPGDGGDIEIQTSTLNITDSSRIE
ASTSGSGEGGIIRIFVFDVINVSNNGFIAAGTSSSGGGGDIEILTPELNLTNAGRLAAST
SGSGQGGIIDIFSPKVSLTNGSTITASTNGPGKGGNIDLIITELNFLNGGEITASTSGSG
DGGDLILEGNSPLTLRGNGRFSVASSTPTSGRAGNLTVNNASILALRDGVTLSAESASEQ
GGGNVNITVDNHVFLTGGSLINASSSNTNAGNGGNVTLTLGNGFLIARPDQNNDIIANAV
GGNGGNININALRIFGLTEQGNSNFNVLRGNLTNDISASSEFGFNGTISLNTLDLDPSQG
LTELPAVLSDRTDQIAASCDIGNTENQGKFVVTGRGGLPLSSSTLGNAAGLPVPWVTAPD
DEPVDIVDLDSSSTFPTLVEAQSVARDKTGNMHFVADPEIFASSKLQAASSDFCQTTYQL
Download sequence
Identical sequences K9Q045
WP_015134293.1.56710 gi|427724088|ref|YP_007071365.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]