SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|510882930|ref|YP_008055598.1| from Salinarchaeum sp. Harcht-Bsk1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|510882930|ref|YP_008055598.1|
Domain Number 1 Region: 304-368,397-445
Classification Level Classification E-value
Superfamily Pseudouridine synthase 0.000000331
Family Pseudouridine synthase II TruB 0.012
Further Details:      
 
Weak hits

Sequence:  gi|510882930|ref|YP_008055598.1|
Domain Number - Region: 182-214
Classification Level Classification E-value
Superfamily DnaJ/Hsp40 cysteine-rich domain 0.00017
Family DnaJ/Hsp40 cysteine-rich domain 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|510882930|ref|YP_008055598.1|
Sequence length 459
Comment pseudouridylate synthase [Salinarchaeum sp. Harcht-Bsk1]
Sequence
MDVVAAARRLLESGPVCDSCLGRPFADRSFGLTNEQRGRSLRTAVALADDADFESGPTAD
CWVCEGHCAEHDAWAERVVDAAADYDFDTYQVGTRTPPLIEENDRLLREEAGLDPDAGEA
FKSAFNREVGKRFGREAGAEVDFDRPDVLALLNLERGDVDVQVNPAFVYGRYRKLERDVP
QTEWPCRECGGSGKQLGEDGEEDCEYCDGTGYMYPTSVEQEIAPLVRDAMEGEEALFHGA
GREDVDALMLGTGRPFVVEVKRPHRRSPDVEALEAEINDAAAGRVEVEGLRLATYEMVER
VKELDASKRYRAYVATEAPLDDASFADALAELDGETVEQYTPERVDHRRASTTRTRTVYE
IDGELHDSAGSDGGAVAPDAVIASRYEDELDLDAIERTGTVEIHGEGGLYVKELISGDEG
RTEPSLAGLLDVPITVTALDVLAVEGEEESFEDEAYFRD
Download sequence
Identical sequences R4VZW7
WP_020447694.1.31664 gi|510882930|ref|YP_008055598.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]