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Domain assignment for Tc00_g034580 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc00_g034580
Domain Number 1 Region: 319-435
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 8.56e-31
Family Reverse transcriptase 0.0032
Further Details:      
 
Weak hits

Sequence:  Tc00_g034580
Domain Number - Region: 77-109
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00419
Family Retrovirus zinc finger-like domains 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Tc00_g034580
Sequence length 444
Comment Hypothetical protein
Sequence
MDRFLPKSMRDAKAQEFETPMQASEMTVSDYDIQFTQLSRYAPYLVQTERERIKRFIKGL
HEPIYRIIVFQRFTFYPEEWPCNQMTAFCYECGGIGHVKRDFPTYRHNQEMAHGSIRPDF
AIALTRNVMRDKGKGVASSSQGRSTGSTQQGVYGEGQARVFALTPQDAHVSNAVVIGNLF
IYGYEASVLFDPRSTHSFMSSNFMPKLGKHYEYIDKSLVVTTLLEESYVAEYVFCSCVVQ
IKDRDTWVDLVLMTTLGMDWLASCYANVECYRKLVKFKFPGEASFIIYGHSSHLVDIVMA
TITREVQSEERNLATTLVVNEIVDVFQEELPELPLKREIKFRIDLIPETQPISMPPYRMA
PAELKQLREQLQDLINKGFIRPSVSPWEAPVLFIKKKDGSLKLCIGYRSVYHQLRIREED
IPKTAFRMRYGHYECHDPVLPSSP
Download sequence
Identical sequences Tc00_g034580

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