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Domain assignment for Tc00_g052050 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc00_g052050
Domain Number 1 Region: 295-389
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.000000481
Family Ribonuclease H 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Tc00_g052050
Sequence length 390
Comment Putative Non-LTR retrotransposon transposase
Sequence
MKWITLIMFIVKNPTFSIIWNGENSEVFTPTRGIRQGDPISPYLFVHCLEKLSHLIDNAA
RKGHWKLLQLTRRGPAFSHVCLVMIQTLDAFCKASGRKVSLSKSRILVSSDINSSQASLL
SNVCLDRWSNKNLSIAGRLSLVQLVTSTMTSYLMQTTYLSKSTIQEIDWLNYNFIWGHTG
SSRKIHALSWDKLCARKEEGGLQGISALCSRCGNQEESQLHAVRDCNSSKSLWLQIILVA
FKGNTMGNLFFLHYMDVMEWRNLAVCDNSFVWPKNAWQQIRTKEMLIAWQPPQHSFVKLN
VDGSVTGQPSLVASRGLLRDENGRWILGFTYKVGISFALMSELWALYWGLKLCWDKGYKK
VQVESTHCCITELLQQLRDCTISHVHREAN
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Identical sequences Tc00_g052050

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