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Domain assignment for Tc00_g095420 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc00_g095420
Domain Number 1 Region: 28-293
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 4e-106
Family Reverse transcriptase 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Tc00_g095420
Sequence length 297
Comment Putative Retrovirus-related Pol polyprotein from transposon 17.6
Sequence
MFIEVSRRLSRTRWGVPSHDNLDWYQGIYPLPRIDDLFDQLQGATVFSKVDLRSGYHQLR
IKEHDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFIDLMNRVFHPYLDKFVIVFIDDILVY
SRDNDVHANHLCIVLQTLRERQLYAKFSKCEFWLQEVVFLGHVVSGAGIYVDPKKIEAIL
QWEQPKTVMEIRSFLGLADYYRRFVHGFSLIAAPLTCLTRKGVKFEWDDVCENRFQELKN
RLTSALVLTLPMSGKGFVVYSDASKLRLGCVLMQDEKVVAYASRQLKRHEVKYLPMI
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Identical sequences Tc00_g095420

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