SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Tc01_g015592 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Tc01_g015592
Domain Number 1 Region: 79-337
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 8.09e-49
Family Reverse transcriptase 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Tc01_g015592
Sequence length 342
Comment Putative uncharacterized protein
Sequence
MLLSIYQQLGVGVVKPTSVTSQLVDRSLTYSYGTVEDVLVNVGKFIFLVDFIVLDMKEDH
EISIILRKPFLATNRDESNHEKVVKKEIIKWLDAIIVYPILDGTWVSSVYCVPKKRGMTV
IFNEKNELIPIRVVTSLRVYIDYQKLNKATRKRCFPFPFICQMLDRLSSQKFYFPEDHEK
TTFTCPYGTFSFRRMPFGLCNTPPLCNLLEKNTLFHFDDAYLKAFLELKNKLISTPFITT
PDWNILFKLMCDASDYEVGVVLGQRKEKIFQIIYYANRTLINAQFNYTTIENECLAIMFA
FDKFHSYLFGIKVIVYTDHLVIKYLIEKKGAKPRLRRKSLLL
Download sequence
Identical sequences Tc01_g015592

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]