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Domain assignment for Tc01_g032140 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc01_g032140
Domain Number 1 Region: 1073-1437
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 3.83e-99
Family Reverse transcriptase 0.001
Further Details:      
 
Domain Number 2 Region: 1492-1599
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.04e-20
Family Ribonuclease H 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Tc01_g032140
Sequence length 1615
Comment Hypothetical protein
Sequence
MASTQQSEGDCLSKDHFSSLPDRVHLDLKQNDFTDLLNIWDKWGATTRANFDRKYGHIAR
LLKVQIDEQLLKAIVQFWDPSYKCFVFNKVDMVPTIEEYSAFLQIDLDNPDKIYWRGQKT
EHRRKLAKMMGITLHRDTEQGQLVMALGIYGLVIFPKVLGHIEIEIIDFFEQVIKKANPS
PSILAKTLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVDKFRKPFHPQTAPIIEFCE
SEWPENRTKEQWISRLRELMSVEVTWRAPWMPHHPILYKSISYAPIMVSRQFGSEQFVPM
THRLNTLEFAYEESGFLKNIEEIAQAWKKTIKDVVYPKEDALRGPIDPEPRDALLESELA
RNKSEVEKASWKQRYEDLQKECEKMKREVSEQRKKARRIEGKYDSLNDKFSVTTSELQRE
IQVRENRVRFQQESIQLLRQEYEELEGVMTTYQQEYERLKQQTEENLVGTINGDTPAEVA
SSSFGANKPKPLSIFYEENRSPMNDTSPTMIRSGITIEAPSPFPYQSDKAVPWNYECNIL
GTASFAPQASSEDLTGVGGITRSGRCYSPEIAERVGKGKPAQGEGGLKKANTFSKDQVDE
SVVAPNNKVKNPVTEKEAGEFLKFIKHSEYSVVEQLTKMLARISLLSLLLNSEKHRNALL
KVLNQAYVAQDISVEKLDHIVGNITVGNFIAFNDEEIPSGGRGSNKTLHITIKCKDHAVP
RVLVYNGSALNVMPRFTLTKLPVDVSYMRTSRMVVRAFDGTTREVVGDIELPIKISPWRP
WIHMAGTIPSSIYQKIKFIAEGQLISVCAEEDILGIQPSSALYVEATEEVPECSFRSFKF
VNATYVGERKVIPTPSLSVAIKMGVKQTVGKGCRAGLGLGKNLQGINRPLTPIKNEERFG
LGYKPTKEERRKLTAEKKIKRTAQLEGKEEEFGERTIPHLYETFRSAGFIHPEAPPKVNQ
VLRIFDELSIHMIRDEEPHEKIHLVYPVLSGEELSNWTATELSLNNEHEDNLDNDLNIDF
EMIPNVDELKNEEEVDDYGLSLDLSRMLEQEENEILPHQELTEMINLENGEEKKEVKIGT
SLSSDERQKLEELLREYVDVFDGKVRMCVDYRNLNRASPKDSFPLPHIDTLVDNTAKHVL
FSFMDGFSGYNQIKMAPEDMEKTTFLTMWGTFCYKVRPFGLKNAGATYQRAMVALFHDMM
HKKIKVYMDDMIAKSHTERDHTVNLNKLFERLRKFQLKLNPAKCTFDVTSGKLLGFIVSE
KGIEVDPDKIRAIQELPPPKTQKEVRGFLGRLNYIARFISQLTCKCDPIFKLIRKRDPEE
WNEECQIAFDKIKEYLTNPPVLVPPIVGKPFILYLTVNKNSMGCVLGQHDETGKKERAIY
YLSKKFMEYESKYSALRQYMLYHTTWLVAKLDPIKYIFEKPYLSGRIARWQVLLSEYDIV
YVSQKSIKWSVIADFLADRANEDYESVSFDFSDEDLMVVLHVEEVGLNELNPWNVYFDGV
SNALGLNFNCTNNMAEYEALVMGLQAAIERKADAINVYGDSALVICQMRGEWETRDSKLV
PYKKLVTELSKQFKEISFNHLPREENQIADALATLAAMFKIKEVANVRPFDLEXX
Download sequence
Identical sequences Tc01_g032140

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