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Domain assignment for Tc02_g013653 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc02_g013653
Domain Number 1 Region: 351-446
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.00000436
Family Retroviral integrase, catalytic domain 0.029
Further Details:      
 
Weak hits

Sequence:  Tc02_g013653
Domain Number - Region: 145-175
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000128
Family Retrovirus zinc finger-like domains 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Tc02_g013653
Sequence length 817
Comment Hypothetical protein
Sequence
MASLKEMVINIVKLNRFEKGNFIRWQKKMHFLFTTFKVAYVLDTPRLNEKGDKEFVNQTR
LRQKWDNDDYICIEHILNGMSDALLMRTKMKLVQNNFGTNWKQDTWPKMQVNLETSKVHV
IKHKLSNKPVSHNTRKHSVGMNNKSHEIKRTKKGLCSHCNKLGHFKVECKLLKYKTRGVN
NKKFVRINIGATNHVHKDKSFFKTLEAINERTVLYMENSSTTQVKGKGTVEHMFIFRKIL
VLNNVYYVVKIRKNLVSGGLLNKYGFKLVFEVDKFVFIKSGQYVRNGYLCENMFKLNINK
NVTSSTCIDTLFNVHGSKLIPNIDENNYMCKTCMVTKITISLFPKVERNSKLLALIHFDI
CDIHSTPSIGGKKYFVIFIDDIYRFCNIYLLHAKDEVMEKFRIYKNEIKLHCELVWEKGF
WGEALLTACHILNRILNKRSKTTPYEVWKGKKKLGEKEIECIFMGYDKHSKAYRYMVINS
NDSFSTNTIIKSKHVIFDKTMFNSIPRPKKLVMESDKLSKNGEKTIEIATIKVLIALASI
HKMVIHQMNVKKAFPNGELDIEVYMEQPEGFVFPKDTKVFFFNFDMKNMGVVNVILGIRI
MRENNGLTLSQSHYVEKIVMKYGKSNCMLKSTSYNSNLKLVSNKDKPIAQNEYARVIGRL
MYVMVCTRLDIAFVIRMLSRFTSNLSKEHWYAIHRVLKYLKGAMNYDICYSSFLFVLEVQ
TDANLLYEISLWPKPMAPILIHCNNEATISKTYNQAYNEKSLYSRLQHSIVRQKINDGII
IISYVKSCETLADLFTKCLKKDLVMKTSRGMDLKPIN
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Identical sequences Tc02_g013653

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