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Domain assignment for Tc03_g012572 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc03_g012572
Domain Number 1 Region: 530-653
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.29e-25
Family Retroviral integrase, catalytic domain 0.015
Further Details:      
 
Weak hits

Sequence:  Tc03_g012572
Domain Number - Region: 157-195
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000126
Family Retrovirus zinc finger-like domains 0.0055
Further Details:      
 
Domain Number - Region: 317-356
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000171
Family Retrovirus zinc finger-like domains 0.0055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Tc03_g012572
Sequence length 908
Comment Putative uncharacterized protein
Sequence
MSIYIKVIDYEIWDVITDGPFIPSTLNVVTNEMILRSRSEWIEFNKVSSCTTAKQVWDKL
RIIHEGTSQVKESKIALLTHNYELLKMKPSEDIISIEAKEKKKSIALKASVLEEELDNLS
CDDDEELAMVTRRFKKLMGQRDRRLAKKGYKRYQGPSWRTRNKNESNKKKELICFECKKL
RHLRSECPLPKDETPKKNKKSKKAMVAATWFDSDALSSDVEKEKAKERVNLRLMATDEES
EVSSAPCDISIDELQEENFLPTELEHSKIDFEILKLDLENRTEALQKAIDENVALKCLIK
ETSRRNTYFKKNSVNVAFRCYICDKIGHLSYDCYRKRGIAQLKEKQPWYMDSGCSRHMTG
NEMLFAKLDKKKGGTVSFGDDSKAQINHVLLVKSLKHNLLSISQLCDKGFKVCFDSNKCE
VIDISTNKISFIGKRIKNMYVIFLKDLKLNYETCLMANEENDNWLWHRRLGHVNVHTISK
LIRKNLVIRLPELKFENNQICDACQIGKQVRTSFKTKKIVSTSRPLELLYTWVYFLAHTN
DALPTFVNHCKKVQNEKRLVIVSARSDRGGEFKGNDFENFCNEKGLDHNFSAPRTPQQNR
VVEKKNQTLKEMARTMLCKNNLPKYFWAKVVNTTAYILNRVSIKAMISKTPYELTKVENQ
TSLTLKVLFDAKSDEAIFLGYVLNSKKNSEENSAGRETETPPFENLQRIENQHDDLPKSW
RYVKDHPQEQIIGDLTQGVKSRKGIRETCEFTAFISQIEPKSFEEAEKELSWILAMQEEL
EQFESNRVWTLVSRPFNHPIVGTKWVFRNKVDEQGHVIRNKARLVAQGYNQEKGIDYDET
FTPIARIEAIRLLLAFACFMNFKLFQMDVKSGEFEMSMIGELKFFLGLQIKQSEEGIFIN
QEDMFKTC
Download sequence
Identical sequences Tc03_g012572

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