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Domain assignment for Tc05_g000341 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc05_g000341
Domain Number 1 Region: 159-197
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000607
Family Retrovirus zinc finger-like domains 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Tc05_g000341
Sequence length 308
Comment Putative Retrovirus-related Pol polyprotein from transposon TNT 1-94
Sequence
MKDLLVQQGLMRPLLGNEEGQLDDMKDVEWAELEQRCVSTIRLCIGDNVFNHFIDKDSVP
RLWAKLEKIYWQKVFLTSYNLGESCIVDVKVEEEEKALLFLASLPDSYEVFVESLICGMD
TITLEQAQATLMSHEARKKNKKGDRDLSGLALVTEVHRRKSTSKRFKGSKSRSNNVKCFH
YKEYGHIKRDCPIKGDKSNENKGDCAFIAEGDDCDVLTISENMNANSDWYLDSASATHIC
YQKDCFDLLQEGVTGNLTLENKSIVKVMGLGVVKIKMFDGIMRYLGGVAYVPEMHKSLIS
LSLLDSKG
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Identical sequences Tc05_g000341

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