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Domain assignment for Tc00_g063600 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc00_g063600
Domain Number 1 Region: 482-834
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.33e-114
Family Reverse transcriptase 0.00027
Further Details:      
 
Domain Number 2 Region: 977-1084
Classification Level Classification E-value
Superfamily Ribonuclease H-like 2.07e-17
Family mu transposase, core domain 0.056
Further Details:      
 
Domain Number 3 Region: 263-292
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000227
Family Retrovirus zinc finger-like domains 0.0033
Further Details:      
 
Domain Number 4 Region: 350-435
Classification Level Classification E-value
Superfamily Acid proteases 0.000015
Family Retroviral protease (retropepsin) 0.068
Further Details:      
 
Weak hits

Sequence:  Tc00_g063600
Domain Number - Region: 1198-1263
Classification Level Classification E-value
Superfamily Chromo domain-like 0.0183
Family Chromo domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Tc00_g063600
Sequence length 1270
Comment Hypothetical protein
Sequence
MPFRYNEDSLSYLTCLRIIEAFILQMVRMRPKTRAPSRRMREQDAPTKMANRQRASTLRG
RGRCGRGTRPVRVDTLVSRQEEGQSSGDVDRHLIGSITIEDLAASLQGVNRIVEMMTTRM
EDIQRVVEGRPTVQESPSSQGQAICQHHEVKRGHLDISLPDFLKLNRLRLEDVAQEWYSS
LCRGRLTDATQLAWAVDCAQRIEMRTSKSKAMRDRVKRAKIEGDQGHRNFSSGMSSSSLL
GPQKDSRLPQRGSDSLGANVGVGQRSFSSRGQTCFWCGQPGHIMRDCPMAHQSPNSTHGF
TQPVSSATSVATPSGRVASGSRGRGASTSSQGGASRFECKSSVDRGQTRVARVLFDPGAT
HSFIAQCFASRLGRDCVRKEEQLVVSTPLKEVFVVEWEYESYVVRVKDKDTLVNLVVLDT
LDFDVILGMDWLSPCHGDRSNAPTILISVIFATRLLRQGCIGYLAIVRDTQVKVGDVSQV
SVVNEFMDLFLEELASLPPKREIEFFIDLIPDTRPISIPPYRMALAELKDVSLWRATVLF
VKKKDGSLRLCIDYRQLNKVTMKKKYPLPRIDDLFDQLQGAQCFSKIDLLHFEQDMGTNE
FLVMSFGLTNAPATFMDFMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLKIMLQILR
VSIVFTEIRSFLGLAGYYHRFVKDFSKIAAPLTKLTCKDTKFEWSDACEDNFEKLKACLT
TAPVLSLPQGTRGYTVFCDASWVGLGCVLMQHGKVIAYALRQLKRREQNYPTHDLEIAAI
VFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQCRWMELLKDYDCTILYHPGKAN
VMADALSKKSMGSLAHISIDRKSLIREIHSLGDMSVHLEVSEANGEMFTKGTNGVLRYGT
RLYVLDSDGLRRKLLEEVRMAAYVVHPGATKMYQDLKEVYWWEGLKKDVAEFVSKCLVCQ
QAKVEHQRPTGLLQPLPVGGYDSIWIIVDQLTKSAHFFSIKTTYGATQYARVYMDEIVRL
HGIPICIVSDRGNDGQSERTIQTLEDMLRACVIDLGVRWDQYLPSVEFAYNNSFKTSIQM
APFKALYGQRRRSPIGWLEVGERKLLGLELVHDATEKIHIIRQRMLSEQSRQKSYADNRR
RDLEFQVGDHVFLKLSPMKGVMRFSKKGKLSPRYIGPFEILERVGAVAYRLALPPKLSNI
HLVFHVSMLRKYNLDPSHEQPVAILDRQVKKLRSKEVASVKVLWRNHTSEEVRWEAEEEI
RTKYPHLFDT
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Identical sequences Tc00_g063600

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