SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSHAP00000000141 from Sarcophilus harrisii 76_7.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSHAP00000000141
Domain Number 1 Region: 1678-1799
Classification Level Classification E-value
Superfamily Bromodomain 6.41e-36
Family Bromodomain 0.00021
Further Details:      
 
Domain Number 2 Region: 472-586
Classification Level Classification E-value
Superfamily DNA-binding domain 1.34e-22
Family Methyl-CpG-binding domain, MBD 0.013
Further Details:      
 
Domain Number 3 Region: 1563-1627
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 4.87e-18
Family PHD domain 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSHAP00000000141   Gene: ENSSHAG00000000118   Transcript: ENSSHAT00000000144
Sequence length 1805
Comment pep:known_by_projection scaffold:DEVIL7.0:GL862059.1:21:20877:-1 gene:ENSSHAG00000000118 transcript:ENSSHAT00000000144 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEANDHFNFTGLPPAPAASGLKPSPPSGEGLYTNGSPMNFSQQGKSLNGDVNVNGLSTVS
HTTSGILNSAPHSSGTSHLHHPNVAYDCLWNYPQYPPANTGSNLKDPPLLSQFSGHRQYP
LNGTIGGSRQGSPPSQNTNLRAGNQEFWANGTQSPMGLNFDSQELYDSFPDQNFEVMSNG
PSSFFTSSPPSPMLGSSVQTFAPSQDPEHGGHPSEAADKELAPIVAENGTGLVGSLELEG
EQPELKLCDYDSSAPSVESLRREVSVLVPDPTVSCLDDPSQLPEQLEGSSILGEDPLEPF
DSLAPEPGSGGLYGMDDSELVGEEDKLPLGDSPDISALECPSLTNSAAFSLLADDSQTST
SIFANPPSPPVLGESVLQDGSFELNNGSDPEQEEVETSVTAASPGLAPSAPAELSPEETD
TDGSSGPGCTPDLEEQLAGGDAASSSGEQVEAHHASPPLALAASPGTGDVLRRRIATPEE
VRFPLQHGWRREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHHVRREHFS
FSPRMPVGDFYEERDTPEGLKWVQLSVEEIPSRIEAITGKRGRPRNTEKTKVKEMPKIKR
GRGRPPKVKITELLSKTDARFLKRLEASDAPSDGEKAKMSKIKKKIRRKAKNQRKQEAKS
SKQKEIKKKSKTEKEKVKAKTDKLKVRKEKIRPKEKEESRPVLKAERVSAPQRRLEERER
QQMILEEMKKPTEDMCLADHQPLPDFSRIPGLVLPSSAFSDCLTIVEFLHSFGKVLGLDP
AKDVPSLGALQEGLLCQGEALDEVQDLLVKLLQAALCDPGLPAYCQSLKILGEKVSEIPL
TRDNVSEILRCFLMAYGAEPAVCDSLRTKPFQAQTPQQKAAVLAFLVHELNGSNIIISEI
DKTLENMSSYRRNKWIVEGRLRRLKTALAKRTGRSEAELLGLEESLGRRRSSRIPEETSG
MEEEEEEDTAQGRWGRRDEEGDALPFSIPELERQIEKLTKRQLFFRKKLLQSSQMLRAVS
LGQDRYKRRYWVLPYLSGIFVEGAEETTALEDVIKQEADSSKGVAVPAPSITSFSTVKKE
LTEGNVKTWSPCVRARGRPRKTKPVPEQPEISVLPLVKEEHKFVQAQVQEQAQEQEQTQT
QVLNGLLEPEDSPMSLGQSQHDLSQSAFLSWLSQTQSHGSLLSSSVLTPDSSPGKLEPGP
AMYPEEPETSQPDLPPPRGPWFNLLPRTPCDAAPSTSPCASEDGPSPDPPTPPASSQPVN
GPSAAKPCSPKPFSSTPLSMSAPKRWAGVSGKGTRSPAGPGQPKRRGRPPSKFFKQMEQR
YLTQLTAQPVPAEMRRGWWWIRDPEELEATLRALHPRGIREKALHKHLSKHRDFLKEVCL
RPPTDPILKPSRCPTVSQKELVCWSPAERAFEADLVMLQCVEELERRVLLADLQIRGWTC
PSLDSAREDLAYYEHLPEPLEDITARGRGREGLVPQREDTNPLDLAVLRLAALEQNVERR
YLREPLWPAHEVVLEKALLSPPDSTALGTTEIAYEITPRVRTWRQTLERCRSAAQVCLCL
GQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMDTVPEGDWFCA
VCLAQQAEGEFPQKPGFPKRGQKRKGGPLGFSEPESRRRRRPRAVSRGQDAAAVSRCSGE
GLSSSKRRRLSMRHHHSDLTFCEIILMEMESHDSAWPFLEPVNPRLVSGYRRIIKNPMDF
STMRERLLRGGYSNSEEFAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQG
KQANL
Download sequence
Identical sequences G3VAD7
XP_012407225.1.9362 ENSSHAP00000000141

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]