SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSHAP00000003206 from Sarcophilus harrisii 76_7.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSHAP00000003206
Domain Number 1 Region: 141-245
Classification Level Classification E-value
Superfamily Bromodomain 7.46e-22
Family Bromodomain 0.0013
Further Details:      
 
Domain Number 2 Region: 1-60
Classification Level Classification E-value
Superfamily SAND domain-like 1.92e-20
Family SAND domain 0.00057
Further Details:      
 
Domain Number 3 Region: 63-123
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000494
Family PHD domain 0.0097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSHAP00000003206   Gene: ENSSHAG00000002829   Transcript: ENSSHAT00000003242
Sequence length 256
Comment pep:novel scaffold:DEVIL7.0:GL857037.1:42744:66875:1 gene:ENSSHAG00000002829 transcript:ENSSHAT00000003242 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TLYKEKLEKGSSEKCIEMADGTWLTPRELEVKGGRERSKNWKKSIYCGGLTLSNLIQESL
EFPSHSLGECPENSNECFVCTDGGKLFCCDSCPRSFHRDNSSLRPLSAQWFCTFCIIRMN
KEKRSSYNKSCQLESEALKHQMCFEQQVKCEYLLMKMYCCRESMLFATDPRNFTAYSKCV
REPMWLDLIKKRLSDETYNTVEGFVLDMRLIFNNCKKFNKDNQFGHLGAKMKEKFEKDFK
EVFNIMSRSNSVCCFL
Download sequence
Identical sequences G3VJ51
ENSSHAP00000003206 ENSSHAP00000003206

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]