SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSHAP00000002057 from Sarcophilus harrisii 69_7.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSHAP00000002057
Domain Number 1 Region: 2-84
Classification Level Classification E-value
Superfamily RING/U-box 2.65e-18
Family RING finger domain, C3HC4 0.0088
Further Details:      
 
Domain Number 2 Region: 88-147
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.000000000000104
Family B-box zinc-binding domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSHAP00000002057   Gene: ENSSHAG00000001829   Transcript: ENSSHAT00000002080
Sequence length 409
Comment pep:novel scaffold:DEVIL7.0:GL856060.1:18121:19350:-1 gene:ENSSHAG00000001829 transcript:ENSSHAT00000002080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGNVRNMLWRQSPFKCPTCRK
ETSATGVNSLQVNYSLKGIVEKYNKIKVSPKMPVCKGHVGQPLNIFCLTDMQLICGICAT
RGSHTKHVFCSIEDAYAQERSAFESLFQGFETWRRGDALSRLDTLESSKRKSLQLLTKDS
DKVKEFFEKLQHTLEQKKNEILSDFETMKLAVMQTYDPEINKLNTILQEQRMAFNIAEAF
KDVSEPVVFLQQMQEFREKIKVIKETPLPSSNLPVNPIFKNFDTSQWERIKLVDVDKMSL
PQENIPFTSKIPWSFYQIFVVLCLVGLLVYFTPTMSLDGTLFDDFSVWKAHLSSFSSCYL
TESAEIADQAILYWEQVVDGVFVFSERFKNYTLVLLNGMAEFVCKYKLL
Download sequence
Identical sequences G3VFV3
ENSSHAP00000002057 ENSSHAP00000002057 XP_003767105.2.9362

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]