SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSHAP00000010563 from Sarcophilus harrisii 69_7.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSHAP00000010563
Domain Number 1 Region: 258-355
Classification Level Classification E-value
Superfamily PDZ domain-like 1.84e-20
Family PDZ domain 0.00074
Further Details:      
 
Domain Number 2 Region: 406-493
Classification Level Classification E-value
Superfamily PDZ domain-like 4.47e-20
Family PDZ domain 0.034
Further Details:      
 
Domain Number 3 Region: 26-128
Classification Level Classification E-value
Superfamily PDZ domain-like 3.94e-19
Family PDZ domain 0.0038
Further Details:      
 
Domain Number 4 Region: 150-236
Classification Level Classification E-value
Superfamily PDZ domain-like 5.39e-17
Family PDZ domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSHAP00000010563   Gene: ENSSHAG00000009119   Transcript: ENSSHAT00000010656
Sequence length 521
Comment pep:novel scaffold:DEVIL7.0:GL849657.1:505387:510041:-1 gene:ENSSHAG00000009119 transcript:ENSSHAT00000010656 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEAATDLQDTAILTQKFTFNPKLGIDNPTLSLADDHDHFDSWGPQRPRFCVLSKQEGGKF
GFYLHKELNRNGHIVRRVEPGTSAQCQGLQDGDQILGVNGDTVEHEDYHGVVQRIRASGP
RVLLTVLAGNVEEVARAHQASGAHLCPVLDASVRPRLCHVVKDEGGFGFSFSHGKRGCFW
LMPSCGGAAERAGVPQGARLLEVNGIGVEGFSPSQLSRKLRQSGEQVTLLVAGPEVEEQC
RQLGLPLAAPLAEGWALPARPRQLHLEKGPQGFGFLLREEKGPSGQLGQFLWEVDPGLPA
DQAGMRAGDRLVAVAGESVEGLGHEEAVTRIRAQGCHLSLIVVDPDADSFFSMVRLSPLL
FLEEAGLQADGPASPQKLPSSSQAEEQASWTTNLASSPAVPTSLVPPALPSFRQCLLRPG
ANGGYGFRLSCGADKPEITISQVTPGGSASQAGLHMGDVILEVNGISVRRENVLEVVRQL
PDAKPPLHLRLATQGRRSIEACSSLEPGGNLEDWTLPSERL
Download sequence
Identical sequences G3W558
ENSSHAP00000010563 ENSSHAP00000010563

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]