SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for AMSG_06949T0 from Thecamonas trahens ATCC 50062

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  AMSG_06949T0
Domain Number 1 Region: 567-683
Classification Level Classification E-value
Superfamily Second domain of FERM 8.11e-17
Family Second domain of FERM 0.001
Further Details:      
 
Domain Number 2 Region: 1119-1225
Classification Level Classification E-value
Superfamily Second domain of FERM 0.00000000127
Family Second domain of FERM 0.0063
Further Details:      
 
Domain Number 3 Region: 492-571
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0000000115
Family First domain of FERM 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) AMSG_06949T0
Sequence length 1284
Comment | AMSG_06949 | Thecamonas trahens ATCC 50062 hypothetical protein (1285 aa)
Sequence
MNGEESSEYSLVSDEPPEVLSLSADRSESPHDLARHARDMTWAEAAGSQPPTASSTSRSA
KGNSERSEPGTTTQSFTRPGHAPSHPHAALSALNSALSSATPYTASADASGSSNVGRLAD
HQSSGSSTPPPVITLAETSPARAVPGSKMRRSRRGAGADGLLSVHSGGAKRKFDPWASAA
TPPRSHAFDDDDDESYSLSSDLLVSPYREPSPAAHFAALRPAALSVAGGVRAPDSSSSPL
SYSATPSVSSPASAKSLAAPFGASTTGDEDDEYTISDSGDPLGGGVGHIFDDDGLGSGSD
SGSGSDVEQKAYGHSFGSSNAAYNDEIAESSGMRSVRGRVATPHPRDDGAFSFDTRDTSR
ASKLLEEARHPRRGDGARDVPSPEDELDSDSDDGPPLAASPDVDPGTLLALINADLDANT
YRNSQPPGTSSSEVIDDEVDPDGVLREARRSSTAGKRVLFGNNFVPKTRCGILRAPRTRA
AHAVRTCTFKQNVKIELPDESYIRLNCLTSTTVKQVIELVADQLGIVQREYLGLLEYSVQ
GYECWLKPESSLLRQVKFVVPSVKFMFKLHPRTIDELTDPLAIQLLYHQTRANLVSGLYD
AELTKSVALEMTANAFQATFGDHVEGLHIPGFLTRPVTLSMFLSRHILRKYRNKVWQKRI
FAVHQLLRGMSKTEAMTAYLRHAAESIPSFSMEYFHVHNATNKAAITLCIGPEFLEVFRK
SRSLGTHSYRDIFRVVLESCGRGTAKRYRITFKIGIVNSPDLPDSAIAPFMVTTDNTTDA
ELILALVQSYTLLYKARARSGGRSRTSSRAKRTRFSRVASHDAIASELGSLYSTPRAISA
GAGLQSSVLLAASSLGGSMGSIPELHSPSGGARNSFAFDGGSGSGSGSDGSDPDVAAAAA
ARDAVRRMSRQRSTDSIGRHGSGLPSRSGRRRANSHGMDQSGRVRGRRKRSSSARESTHG
ELGAHAAEARRAEAAQAALAAKAARDRRRRPGPPGRELLSRDSLQVIQLEAAVSGTLPNV
RVALGDGSSVRALHAEPGTTAIELYKQYRDMLDLADFVELHVVVAAASLPTLAGLVVSPD
KQWVWVEPAEPLLPQVLAADETSRRQVQLVVRIRSFLGFNALELSDYETIHAAYLHVRGQ
LLHGEFDAELDMPIMIRLAALQVQARRGNWDESDEVVVDVSTVAPPALAPKLAAADVVLM
YQSLAARPSIEAERAFLDITSTLSNFGAFVFPVDVAHAGKALDLLLAPDAHGLAGPDRKV
VVMGLATAYEAADLLSCLFAHDAY
Download sequence
Identical sequences A0A0L0DFP2
AMSG_06949T0 XP_013756452.1.50528

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]