SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for tetur08g01870 from Tetranychus urticae

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  tetur08g01870
Domain Number 1 Region: 40-77
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000131
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 2 Region: 88-120
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000353
Family LDL receptor-like module 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) tetur08g01870
Sequence length 229
Comment length:230 (n/a) (PREDICTED: similar to mosaic protein LR11)
Sequence
MVLLLVIICTISIAISNGSIINNRNQLLKGDFTDKVNNQPVCLPNQFHCFNGPCINQEYR
CNGLIECPQGDDEQSCPPLPSPKEDSCAYQCQESKRCIPRSLLCDGKIQCLLADDEFHCN
FAIGVTGQQSGKSSSVSQLNGADPPFNQAIAMSDTENQSNVHSINSFDPPKDGSDYVFVN
FGPIINGDKNVNGDGNKINSGNGNGNGNGNGNGRNNSDGNRSYNNNTII
Download sequence
Identical sequences T1KAV2
XP_015785250.1.93521 tetur08g01870

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]