SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|397779556|ref|YP_006544029.1| from Methanoculleus bourgensis MS2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|397779556|ref|YP_006544029.1|
Domain Number 1 Region: 128-254
Classification Level Classification E-value
Superfamily Ligand-binding domain in the NO signalling and Golgi transport 3.71e-26
Family MJ1460-like 0.021
Further Details:      
 
Domain Number 2 Region: 15-98
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.0000000000000102
Family Hypothetical protein PH1932 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|397779556|ref|YP_006544029.1|
Sequence length 265
Comment hypothetical protein BN140_0390 [Methanoculleus bourgensis MS2]
Sequence
MDSRGRPGRPSGIREIDLYSTPEGARAVGNPVRRVILAALREREHSFDEIVALSGRVKST
VSVHLQEMAAAGVVGSRPDPDDARKKIFFLTGDLVGTVSAEDRIADALSAYAGVYGAGAA
DPFAFYKLTFRTVRVLLMQEGILLDPLLTRAGEWIGEELYPAVADPTTEVFCTNIARFWE
DHNLGRVEVAGTEPLTLLVYDCFECEDLPVTGRPACAFDSGILRALFSGHYGRPTAAIET
RCYSMGFDHCRFEVVPEDGGGERGG
Download sequence
Identical sequences I7J7D7
WP_014866290.1.51038 gi|397779556|ref|YP_006544029.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]