SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|397780687|ref|YP_006545160.1| from Methanoculleus bourgensis MS2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|397780687|ref|YP_006545160.1|
Domain Number 1 Region: 280-567
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 1.05e-144
Family Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 0.0000000023
Further Details:      
 
Domain Number 2 Region: 5-279
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase subunits 1.49e-141
Family Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 0.0000000162
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|397780687|ref|YP_006545160.1|
Sequence length 568
Comment methyl-coenzyme M reductase alpha subunit [Methanoculleus bourgensis MS2]
Sequence
MAKIERTQKMFLKALKEKFQGQDIESETAEFYKFNGVRQSPRKMEFMKASRAIEMDRGIS
MYDPERCHLGGIPMGQRQLMTYEVSGTGVFVEGDDLHYVNNSAMQQFWDDIRRTVIVGMD
LAHQTLQKRLGKEVTPETINEYLHILNHAMPGAAVVQEHMVETHPGLVDDCYVKVFTGDD
DVADDIEPQFLLNIEKLFPAKQAEELKAEVGKGMYQAIHIPTAVSRTCDGGTTSRWSAMQ
IGMSFIAAYRMCAGEAAVADLSFAAKHAGVVQMASLLPARRARGPNEPGGIKFGLFADIV
QANRKYPNDPAKAALEVVGAGTMLFDQIWLGSYMSGGVGFTQYATAAYTDNILDEFTYYG
MDYIKDKYKVDWKNPSAKDKIKPTQDVVNDMATEVTLNAMEQYEQFPTMMEDHFGGSQRA
GVIAAASGLTTAIATGNSNAGLNGWYLSMLLHKDGWSRLGFFGYDLQDQCGSANSLSMEP
DRGLMGELRGPNYPNYAMNVGHQGEYAAIVGGSHYGRGDAFCYSPLVKVCFADPALKFDF
AEPRREFAKGAIREFMPAGERSLIIPAR
Download sequence
Identical sequences I7LMP5
WP_014867419.1.51038 gi|397780687|ref|YP_006545160.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]