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Domain assignment for gi|397781229|ref|YP_006545702.1| from Methanoculleus bourgensis MS2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|397781229|ref|YP_006545702.1|
Domain Number 1 Region: 639-759
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 9.77e-30
Family Heme-binding PAS domain 0.013
Further Details:      
 
Domain Number 2 Region: 758-884
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.43e-25
Family Heme-binding PAS domain 0.074
Further Details:      
 
Domain Number 3 Region: 43-150
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.16e-24
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.084
Further Details:      
 
Domain Number 4 Region: 515-640
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.00000000000223
Family PYP-like 0.088
Further Details:      
 
Domain Number 5 Region: 298-391
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.00000000808
Family Heme-binding PAS domain 0.044
Further Details:      
 
Weak hits

Sequence:  gi|397781229|ref|YP_006545702.1|
Domain Number - Region: 214-264
Classification Level Classification E-value
Superfamily GAF domain-like 0.00632
Family GAF domain 0.017
Further Details:      
 
Domain Number - Region: 468-527
Classification Level Classification E-value
Superfamily GAF domain-like 0.0192
Family GAF domain 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|397781229|ref|YP_006545702.1|
Sequence length 971
Comment PAS/PAC sensor protein [Methanoculleus bourgensis MS2]
Sequence
MPDFYDPRSRLPSLQDQTRMPTPDFSTTPLGDESGVPAELADETVPYGIWICGPDGGVLY
LSDSYLDLAGMTLEECRGTGWASNIHPEERAAALAAWEHTVATGETWSRDYRILGSDGEY
HTIASRGVPIRDVAGQVILWAGINLDITGRERLQGLVKEFRTLYAISRLIGEGDAGVEEV
FRRTADLLPGGFQNPGRVSIRVVPGTAAPGGGRITVPIIAGRRTVGHLVVETDNPVRQQE
RDLVAAAAAMLGAAVGQAEANAATTASERQYRLLFDQMLDVGLLLEVIRGGSGEPAGFRV
IQINRKAEEALGRRRDEVAGEDLVTAVPSVGPVTLDLCRGVARTGTPVHREVYSPDVDAY
YELRAYRPEYDRLVVIINDITDRRRAEEKLRMQRSDLDNRVRELATLYAMTGIVERPGIT
LDAILQEVATVLPAGWLHPEDAVARITLDDREYLSAGFCETSWRQESPIIVHGRTAGRVE
VCYLHEHPRADEGSFLTEERSLIDTVAERLGRTIERMRADEGLRRSEEKYRLLFEQMLES
YTLYEVVRDNEGSPVDYRLLELNEKAADLFGRSREELVGRRLFDVFPAIREGAGALYGEV
AETGVPVQRRLQEPGSGRWYELHIYQPQPGRLAVIGQDITEQKKAERALRESEERFRGIF
EQAGAGIALIDPGGRITETNPAFVRMFGYDEDELHAMLFPDLIFSPDRENAGALPRESVQ
REMRYVTKDGRTIWGRLTTSLLHDPGERGFVIGMVEDITDWREMQNALRESEERFREIAQ
RSFDMIYTCYADRGITYISPAVMRILGYTPEEMIGVQCRDYVLDESWSAWLEARIRVARG
EPVEGLLVELRRKDGTAAFVEMNESPIIENGEVVGVQVVGRDVSDRKRYEDLRLQAFYQI
EQNIEQFAILADHIRLPLQVILGTADLIDDGGASAKIRRQVDRINGIVKQLDEGWVESRK
IREFLRRNELV
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Identical sequences I7KDL3
gi|397781229|ref|YP_006545702.1| WP_014867959.1.51038

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