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Domain assignment for gi|479150321|ref|YP_007780497.1| from Ruminococcus bromii

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|479150321|ref|YP_007780497.1|
Domain Number 1 Region: 100-176,245-280,344-447
Classification Level Classification E-value
Superfamily L domain-like 0.00000000000000136
Family Internalin LRR domain 0.08
Further Details:      
 
Domain Number 2 Region: 475-547
Classification Level Classification E-value
Superfamily Type I dockerin domain 0.000000000412
Family Type I dockerin domain 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|479150321|ref|YP_007780497.1|
Sequence length 549
Comment Dockerin type I repeat [Ruminococcus bromii L2-63]
Sequence
MRKRVNKIISVALSATLAFGVFTALPMSANAAVSTASEVSAEAIPKHELYKSYTYGGYKY
RIVGQKSNGRFNAWIESYSGKSASVNVPASVGDCDMVGIDNNCFSFNKTLKTIIVPKGIA
EIGSSAFLGCTALTSVSLPSTLTKINFWAFKNCTSLSTLSIPSSVVSIGDNAFDNCLWYT
NQSNGIVYAGKVAYKYKGKLADNSSVTIKSGTVSIADYAFTDQKLTSVTLPSSLVSIGEQ
AFSYTNLKTVTIPKSVSSMGYNPFAYCSQLSSITVQSGNTNFYVQNDLLIAKNHMYSVTK
DITDPDAPSTESRSYTSYAPYGSVVISFPSASTLKTVTIPETVKAIGNYAFAGSKIEKLT
LNSGLESILTSAFSGCTNLSSVSFSDSIISICDSSFEECTSLKNLKFGKNLEFISYYAFY
NCQNLQSVTIGENVKAICCDSFGNCNALVINGKIGSTAETFAKKYGYKFNSSETTRLKGD
VDNNGIINVVDATDIQKYIVNLTDENGNKFIDVNNAEDVYVADVNGDGIINVVDATLIQK
YIVGLVESL
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Identical sequences D4L525
gi|479150321|ref|YP_007780497.1|

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