SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|479150730|ref|YP_007780906.1| from Ruminococcus bromii

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|479150730|ref|YP_007780906.1|
Domain Number 1 Region: 58-466
Classification Level Classification E-value
Superfamily (Trans)glycosidases 3.69e-88
Family Amylase, catalytic domain 0.00000061
Further Details:      
 
Weak hits

Sequence:  gi|479150730|ref|YP_007780906.1|
Domain Number - Region: 476-548
Classification Level Classification E-value
Superfamily Glycosyl hydrolase domain 0.00339
Family alpha-Amylases, C-terminal beta-sheet domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|479150730|ref|YP_007780906.1|
Sequence length 551
Comment Glycosidases [Ruminococcus bromii L2-63]
Sequence
MKKILSILLAGAMLAGCVLTGCSDSSSSKSDSSDGNTAKVADPIEGVKATASTDKYRNYY
EIFVNSFCDSNGDETGDLQGIISQLDYLNDGDPNSGDDLGVDAIWLTPIMPSKSYHKYDV
EDYYNIDPDFGTLDDFDKLIEECHKRGINVILDLVLNHASSKNPLFTKAVEEVADNKLDG
NAEYFEIHKASYFDSNTQTISLGNGYACEANFSQEMPEWNLNSKKTREEFTKIAKFWLDR
GVDGFRLDACKYFTNKETDGTEFLKWFYDTCKGIKEDVYMVGENWTDDSDIQELYKSGID
SQFAFKFSTSTGTIISNIISQGGMATAKKIMNYDNKMAESNPNAINAMFLSNHDQVRSGN
ALESQGLSSQKLAAAVYMLAPGNPFIYYGEEIGIKAPNTTNDAAYRTQMVFDSENLPDIY
VNGIGDEPDVPTGGGVKQQLADKDSLLNYYRRIITIKNQNPEIARGRIVGTQGFDDKTVG
AYYVEYEDSKLLIIHNFSKNDAKELTITDDMIKNATLRADLIPESSSKHTELKDGKISVP
PQSTVIIKSAE
Download sequence
Identical sequences D4L684
gi|479150730|ref|YP_007780906.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]