SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXMAP00000016761 from Xiphophorus maculatus 76_4.4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXMAP00000016761
Domain Number 1 Region: 509-636
Classification Level Classification E-value
Superfamily TIMP-like 7.59e-23
Family Tissue inhibitor of metalloproteinases, TIMP 0.022
Further Details:      
 
Domain Number 2 Region: 273-344
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000795
Family Laminin-type module 0.044
Further Details:      
 
Domain Number 3 Region: 342-397
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000234
Family Laminin-type module 0.02
Further Details:      
 
Domain Number 4 Region: 405-459
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000949
Family Laminin-type module 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXMAP00000016761   Gene: ENSXMAG00000016726   Transcript: ENSXMAT00000016785
Sequence length 638
Comment pep:known_by_projection scaffold:Xipmac4.4.2:JH556669.1:2886165:2896777:-1 gene:ENSXMAG00000016726 transcript:ENSXMAT00000016785 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRLGTLLAFTLTCSSFSLSAEQSKVKSPGGHSRCLDRACNPGIGNLAAGRVLHTQSVCGS
NSSERFCFFKQTAGPRGKPSCSAARCARCNAAKPAQAHPASAMSDSSFRHPDTWWQSAEG
LEEEEALRLDLETKFLFTHLILVFRSPRPAAMLLERSQDFGRTWRTLRYFAQDCEKMFGL
AEGLPLEEDGATCTSKYSAAFPCTRGEVIYRGLSPWRSVDPYGLAAQNQLTVTNLRVRLL
QRQQCPCQTKHPGAASLPTDHYAIYDFVVKGSCLCNGHADHCVPARGYQPGPAKASSVVH
GKCVCRHNTAGDHCERCAPLYNDLPWQAANGIMGTPHECQKCKCNDHARSCHFSRGLWLA
TGRRRGGVCDHCLHNTEGRHCQNCKRGFYRDPSRPKTAPDSCKPCSCHPVGSVLSAGGTI
CGPSTGECACKPGVGGPHCDKCIMGYWGLHEYGCRPCDCTGDCDPYTGDCVSGVGAEVLY
AAAGNPGNGSNDSETAISRAKELFSALHHAEKCECLEGTLGSPKWFCVAKFDYVLVVKVM
SAHDKGSHAEVEAKIKKVLQQNPQMKIQHGNVTLFPESWTVRGCTCPILNPGDEYVVAGH
KNWKTGRLMVNTRSFVKPWKSSLGRKLLHIIRKDCGRR
Download sequence
Identical sequences M4AQL6
ENSXMAP00000016761 ENSXMAP00000016761 XP_014329336.1.87360

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]