SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXMAP00000010294 from Xiphophorus maculatus 69_4.4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXMAP00000010294
Domain Number 1 Region: 561-803
Classification Level Classification E-value
Superfamily VPS9 domain 1.96e-54
Family VPS9 domain 0.00067
Further Details:      
 
Domain Number 2 Region: 79-200
Classification Level Classification E-value
Superfamily SH2 domain 0.00000000000000458
Family SH2 domain 0.0026
Further Details:      
 
Domain Number 3 Region: 820-898
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000439
Family Ras-binding domain, RBD 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXMAP00000010294   Gene: ENSXMAG00000010264   Transcript: ENSXMAT00000010308
Sequence length 926
Comment pep:novel scaffold:Xipmac4.4.2:JH556679.1:2438055:2459905:-1 gene:ENSXMAG00000010264 transcript:ENSXMAT00000010308 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
FQLIDTFALEIGELKKEMVQTAPALDKEPLEIQGALMKHELHGGAFLQPPRCRGSVGEWD
SGYDSLRRRMSVLERLTQTHQVWLLLAVSEDEASDILLKQPPGVFLVRKVLQRKVLSVRL
DKDQSENPISHFNVRESQYSFSMEGSGISFADLFHLVAFYCVSRDILPFTLKLPEAISSA
KTQKELEEVAQLGAGFWDSALCSQRRCSTPPCHRLSRTLSPQRTKRTAEVEESHQSRTQP
PRRLPGRRPPTGPLCFVTPLFLQTHSRDPDPPEKVADSPPLSSSRCAKPDLDRTKLNGKP
RSPPPRPPPPRSAPSRRPAPPPPGPPPAVSRTKSMPVAAKGQQPSSRRPAPAPPALGGRT
SSSTKSTSSPNRPPPRPKMPDLEAHRCHIALDDETIAKALSRANLPTCQPPPVAEEPSRS
LSGPDERGRQRFSDMSMSTSSSDSLEYSRSPGFSLALAPSPPQHPAEDTSEDDEDAEEEE
EEDYGVGMEGDLESRLRPILKARRRRVGVSLGGSSFVLPRSLKGRFSKVGGMLSSLITPE
KRAVKRIAELSRDKSSYFGSLVQDYISFVQENRSCHTSGMDFLQTVRQFMTQMKAYLRQS
SELDPPLESLIPEDQIDRVLEKAMHKCVLKPLKSVIEVILHDFQVNSGALQQLRENLALA
RTKKPHELGVDGAVPPDSVAIEKIRQKFLNMRKMYSPDQKVSLLLRVCKLIYTIMQDNSG
RMYGADDFLPMLTYVVAQCDMPQLDTEVQYMMELLDPTLLQGEGGYYLTSSYGAMALIKN
FQEEQAAQVLSSEARNTLHQWHRRRTSQHSAPSVDDFQNFLRVALQEVGSGCTAKTLQVQ
PYTTAEEVCSLCAYKFKIPDPENYALFLITEETRQQLAADTHPQQIKAELHSRPLAHVFH
FVYRRVDNLNLCVPTHINNGNCLQMK
Download sequence
Identical sequences M4A750
ENSXMAP00000010294 ENSXMAP00000010294

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]