SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXMAP00000017300 from Xiphophorus maculatus 69_4.4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXMAP00000017300
Domain Number 1 Region: 13-183,304-336
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 0.0000000000000131
Family Integrin alpha N-terminal domain 0.021
Further Details:      
 
Weak hits

Sequence:  ENSXMAP00000017300
Domain Number - Region: 275-377
Classification Level Classification E-value
Superfamily Quinoprotein alcohol dehydrogenase-like 0.00243
Family Quinoprotein alcohol dehydrogenase-like 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXMAP00000017300   Gene: ENSXMAG00000017228   Transcript: ENSXMAT00000017324
Sequence length 433
Comment pep:novel scaffold:Xipmac4.4.2:JH556703.1:1463468:1476742:-1 gene:ENSXMAG00000017228 transcript:ENSXMAT00000017324 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRSLNFVHRISLDFTGTMFPHAICLGDADNDSLNELIVGDTSGKLLVYKNDDSKPWITRT
CVGMLTCVAAGDVCNKGKNLVVAVGAEGWFHLFDLTAASASKSDSSSQHELLCPDDQRPF
FTQHIPANTKVILISDIDGDGRCELVVGYTDRVVRAFRWEEPSDSSDGGSGQLVLLKKWL
LEGQVDSLSVNPGPEGLPELMVSQPGCGYAILLCTWTQQDSTESEDDAPATPGSDGPSRD
VVLHLTSGRIHNKNVSTHLIGSISKGSKEESSKCGLFALCTLDGTLKLMDSSEQLLWSVQ
VDHQLFALQKLDVTGDGREEVVACAWDGQTYIIDHNRTVVRFQFDENVNAFCAGQYTCKE
GKNSPCLVYVSFNQKIYIYWKVELERMESSNLQRVLEEKPEFKSQLEALGVDGEDPAAVR
DLVANVLYQDAQT
Download sequence
Identical sequences M4AS55
XP_005800012.1.87360 ENSXMAP00000017300 ENSXMAP00000017300

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]