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  Home > Genomes > Xiphophorus maculatus 69_4.4.2 > ENSXMAP00000017374

Domain assignment for ENSXMAP00000017374 from Xiphophorus maculatus 69_4.4.2

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSXMAP00000017374
Domain Number 1 Region: 491-656
Classification Level Classification E-value
Superfamily A middle domain of Talin 1 2.62e-71
Family A middle domain of Talin 1 0.000000355
Further Details:      
 
Domain Number 2 Region: 755-891
Classification Level Classification E-value
Superfamily I/LWEQ domain 3.53e-51
Family I/LWEQ domain 0.00000214
Further Details:      
 
Domain Number 3 Region: 2296-2487
Classification Level Classification E-value
Superfamily I/LWEQ domain 1.08e-50
Family I/LWEQ domain 0.00013
Further Details:      
 
Domain Number 4 Region: 661-785
Classification Level Classification E-value
Superfamily I/LWEQ domain 6.54e-50
Family I/LWEQ domain 0.00000485
Further Details:      
 
Domain Number 5 Region: 1840-1974
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 2.46e-45
Family VBS domain 0.00000922
Further Details:      
 
Domain Number 6 Region: 1227-1363
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 5.73e-41
Family VBS domain 0.017
Further Details:      
 
Domain Number 7 Region: 197-311
Classification Level Classification E-value
Superfamily Second domain of FERM 1.44e-31
Family Second domain of FERM 0.0000013
Further Details:      
 
Domain Number 8 Region: 1076-1209
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 4.08e-25
Family VBS domain 0.012
Further Details:      
 
Domain Number 9 Region: 312-402
Classification Level Classification E-value
Superfamily PH domain-like 7.79e-24
Family Third domain of FERM 0.0000182
Further Details:      
 
Domain Number 10 Region: 1471-1557
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.0000000000000235
Family I/LWEQ domain 0.0099
Further Details:      
 
Domain Number 11 Region: 1696-1815
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.00000000753
Family VBS domain 0.038
Further Details:      
 
Domain Number 12 Region: 2006-2133
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.000000957
Family VBS domain 0.028
Further Details:      
 
Domain Number 13 Region: 1585-1661
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.00000439
Family VBS domain 0.021
Further Details:      
 
Domain Number 14 Region: 81-137
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000765
Family Ubiquitin-related 0.066
Further Details:      
 
Weak hits

Sequence:  ENSXMAP00000017374
Domain Number - Region: 923-985
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.00255
Family I/LWEQ domain 0.0072
Further Details:      
 
Domain Number - Region: 2108-2229
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.0275
Family I/LWEQ domain 0.0074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXMAP00000017374   Gene: ENSXMAG00000017242   Transcript: ENSXMAT00000017398
Sequence length 2542
Comment pep:novel scaffold:Xipmac4.4.2:JH556668.1:2873323:2952971:-1 gene:ENSXMAG00000017242 transcript:ENSXMAT00000017398 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MVVLSLKICVRQCNVVKTMQFEPSTAVYDACRIIRERVPEAQTGQASDYGLFLSDEDPRK
GIWLESGRTLDYYMLRNGDILEYKKKQRPQKIKMLDGAVKTIMVDDSKTVGELLVTICSR
IGITNYEEYSLIQETVEEKKEDGTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSR
TFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEF
GGIQAQIQFGPHIEHKHKPGFLDLKEFLPKEYIKQRGAEKKIFQEHKNCGEMTEIEAKVK
YVKLARSLRTYGVSFFLVKEKMKSKNKLVPRLLGITKESVMRVDEKTKDVVQEWPLTTVK
RWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEES
TMLEESVSPKKSTILQQQFNRVGQVNQSSVALPGVIRFGSIGTESPSMGTMPSPQQQITM
GQMHRGHMPPLSSAQQALMGTINTSMQAVQKAQIDLGEVDDLPPLGQDMASKVWIQNKMD
ESKHEIHSQVDAITAGTASVVNLTAGDPTDTDYTAVGCAITTISSNLTEMSKGVKLLAAL
MEDDVGGGNDLMKAARTLAGAVSDLLKAVEPTSGETRQTVLTAAGSIGQASGDLLRQIGE
NETDERFQDILMNLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATQCALSTSQLV
ACAKVVSPTISSPVCQEQLIEAGKLVDRSVESCVQACLSATEDGELLKQVSAAASVVSQA
LADLLQHVRQYTARGEPIGRYDQATDTIMTVTESIFTSMGDAGEMVRQARVLAQATSDLV
NAMRSDAEVEVDVDNSKKLLAAAKLLADATARMVEAAKGAAAYPENEDQQQRLREAAEGL
RVATNAAAQNAIKKKLINRLENAAKQAAAAATQTIAAAQNAAASNKNTAAHQQLVQSCKA
VADHIPQLVQGVRGSQAKPEDLSAQLALIIASQNFLQPGSKMVTSAKSSVPTVTDQAAAM
QLGQCAKNLATCLAELRTSAQKAHEACGPMEIDSALTAVQTLRSELQDAKLAAANTQLKP
LPGESLEKCAQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGIAARETAQALKILAQAARGV
AASTMDPKAAAAMLDSARDVMEGSALLIHEAKQALMSDGDAESQQRLAQVAKAVSHSLNN
CVNCLPGQKDVDMALKSIGEASKKLLIETIPPASKSFQEAQNDLTQTAADLNHSAGEVVH
ASRSSSNQLASASGKFSQDFDEFLDAGIEMAGHTQKKDDQVQVIGNLKNISMASSKLLLA
AKSLSVDPAAANVKNLLAAAARAVTDSINQLITLCTQQAPGQKECDNALRELEAVRGMLD
NPSEPVSDLSYFDCIESVMENSKVLGESMAGISQNCKTGDVPAFGDCVGSASKALCGLTE
AAAQASYLVGVSDPNSQAGHQGLVDPIQFARANQAIQMACQNLVDPQSSPSQVLSAATIV
AKHTSALCNACRLASSKTTNPVAKRHFVQSAKEVANTTANLVKTIKALDGDFSEENRNRC
RVATAPLIEAVENLTTFASNPEFASVPAKISTEGSAAQVPILHSARSMLDSSTHLLKTAR
SLVINPKDPPTWSVLAGHSRTVSDSIKGLITAIRDKAPGQRECDSSIDNINKCIRDIEQA
SLAAVSQNLPSRDDISLEALQEQLTSAVQEIGYLIDPVSTAARGEASQLGHKVTQLAGYF
EPLIKASVGVASKLSDHQQQMTFLDQTKTLAESALQMLYAAKEGGGNPKAAHTHDAIAEA
AQLMKEAVDDMMVTLNEAASEVGMVGGMVESIAEAMAKLDEGTPAEPEGSFVDYQTNMVK
HSKAIAVTAQEMMTKSVTSPDELGALASQVTVDYSQLAVQGRLAAHTAEPEEIGFQIKSR
VQELGHGCIFLVQKAGALQISPSDSFTKRELIDCARAVTEKVSLVLSALQAGNKGTQACI
TAASAVSGIIADLDTTIMFASAGTLNAENDESFADHRENILKTAKALVEDTKMLVSGAAS
GQDKLAQAAQSSAKTITQLTDVVKLGAASIGSDDPETQVVLINAVKDVAKALAELISATK
CAAGKAADDPSMYQLKSAAKVMVTNVTSLLKTVKAVEDEATRGTRALEATIECIKQEMAL
FQSRDAPNKTTTPEEFIRMTKGITIATAKAVAAGNSARQEDVIHTANLSRKAISDMLTTC
KEAAYHPEVNEEVKNRALMFGAECTTGYIDLLEQVLLVMQKPSAEQKQHLAACSKRVAGA
VTELIQTAEAMKGSEWVDPEDPTVIAETELLGAAASIEAAAKKLEQLKPRAKPKQADETL
NFEEQILEAAKSIAAATSALVKSASAAQRELVAQGKVGSIPANAVDDGQWSQGLISAARM
VAAATSNLCEAANASVQGHASEEKLISSAKQVAASTAQLLVACKVKADQDSEAMRRLQIA
GNAVKKASDNLVRAAQKAAFDKADEDNVVVKTKFVGGIAQIIAAQEEMLRKERELEDARK
KLAQIRQQQYKFLPSELREDAN
Download sequence
Identical sequences M4ASC9
ENSXMAP00000017374 XP_005796221.1.87360 ENSXMAP00000017374

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.