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Domain assignment for ENSXMAP00000001535 from Xiphophorus maculatus 69_4.4.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSXMAP00000001535
Domain Number 1 Region: 201-313
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00000000000582
Family Spermadhesin, CUB domain 0.0058
Further Details:      
 
Domain Number 2 Region: 403-441
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000209
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 3 Region: 26-139
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00000314
Family Spermadhesin, CUB domain 0.0084
Further Details:      
 
Domain Number 4 Region: 145-183
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000445
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 5 Region: 312-350
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000916
Family LDL receptor-like module 0.0016
Further Details:      
 
Weak hits

Sequence:  ENSXMAP00000001535
Domain Number - Region: 375-401
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000851
Family LDL receptor-like module 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXMAP00000001535   Gene: ENSXMAG00000001533   Transcript: ENSXMAT00000001538
Sequence length 718
Comment pep:novel scaffold:Xipmac4.4.2:JH556845.1:135994:142540:-1 gene:ENSXMAG00000001533 transcript:ENSXMAT00000001538 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTVSNTLSALVIISITACSHFEPASCFTQCGRGSQVIDSKVGEIRSSAYHSWSYHFGVIY
DCWIIKGLEDEPIVLSFTQFSAQCEKERLSIRSSSGGEPHVLCGDKLPQPMEFPGGNITL
MHQFYPHSYPVSSFMLNFARDSGYCPLETSFRCPGGRCLPLSWRCNGQVECLDDDLHSDE
EDCDDYVDYAEELVVTPTPIEWPCGGLLQTFYGTFSSPSSEGGRMLCIWTLDPQDSRPLR
LDLQQIVLGPWDRLTVYNREGGKGDIIKNITSAFNYKSLKVESHTGLMSLVFEKAASSVG
TGFKATFHVGSYCPPWESRCGGAAGGCFTKEQRCDGKWDCPETGKDEQGCRGCSENQFAC
GLAGQRALPPSRYPGTPVCYPVTERCNYQLYCTDGSDEKDCSVCQPGTFHCDSNRCVFES
WRCDGQVDCKDGTDELNCTVMLPRKVITAATVGSLICGLLLVIAMGCTCKLYSLRTREYS
MFAPISRLEAEMIQQQAPPSYGQLIAQGIIPPVEDFPTESPNETSSLSLRGILQLLRQDA
SNSPRRRRRPRFVRRVVRRMRRWGLIPRTPSRQNQTSGSNQQEANSAAPGQEKLGLLAQT
EQQQQLREEEASAPLLPLPSPPVFSTPPPPYAPPAPPQTPPVTVPPSSPSLASIFQTIGL
SISLFRASPPSSSSTNSMPLSASPSFSSSSSSSSSDDEVLLIPLSEDNTSEDDVPMLT
Download sequence
Identical sequences M3ZH43
ENSXMAP00000001535 ENSXMAP00000001535

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