SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|112419065|gb|AAI21920| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|112419065|gb|AAI21920|
Domain Number 1 Region: 126-209
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 4.14e-44
Family variant PHD-like domain 0.0000398
Further Details:      
 
Domain Number 2 Region: 201-330
Classification Level Classification E-value
Superfamily EF-hand 0.00000000736
Family Calmodulin-like 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|112419065|gb|AAI21920|
Sequence length 409
Comment hypothetical protein MGC145979 [Xenopus (Silurana) tropicalis]
Sequence
MGVLMSKRQTVEQVQKVSIAVSAFKDGLKDRPPSKRKSEGCIRKGSKADVLDQVLEEEKD
ESGSNPGSPCQSQPRQENPINRAAWERLRDGRGVEPEEFNKNSRFTPPAFIRPKRALNDD
EPLEISLEQREEIPNDEMCEICEVWTAESLYPCRICSRVFHDGCLRRMGYLRNDNTLEVT
EMAHTETGWSCYYCDNLNLLLTEEEMYSLMETFSHCKVIPECPLTLDDFLHYKHLVNRRL
QEKQLSDDLEEQATLQFSSMDPEKKGQVEWGDFLSHESICLMQKLRTENSLLRLLTAKER
ERARATFLSLDQDNDKVINGSECRRAQHGWFRKQSKEAVSCNVSISHVGPMSESSPASST
SGKSQDKTPLTSYPDEGRQVSWDTFLKENAIFILAARPNSPAIHLKPSV
Download sequence
Identical sequences Q0P4S9
NP_001072490.1.99540 gi|112419065|gb|AAI21920| gi|118404930|ref|NP_001072490|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]