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Domain assignment for gi|134025431|gb|AAI35443| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|134025431|gb|AAI35443|
Domain Number 1 Region: 814-999
Classification Level Classification E-value
Superfamily Fibronectin type III 7.43e-36
Family Fibronectin type III 0.00062
Further Details:      
 
Domain Number 2 Region: 613-802
Classification Level Classification E-value
Superfamily Fibronectin type III 2.12e-30
Family Fibronectin type III 0.0000589
Further Details:      
 
Domain Number 3 Region: 425-517
Classification Level Classification E-value
Superfamily Immunoglobulin 5.52e-18
Family I set domains 0.034
Further Details:      
 
Domain Number 4 Region: 328-424
Classification Level Classification E-value
Superfamily Immunoglobulin 7.92e-18
Family I set domains 0.0083
Further Details:      
 
Domain Number 5 Region: 520-619
Classification Level Classification E-value
Superfamily Immunoglobulin 1.1e-17
Family I set domains 0.01
Further Details:      
 
Domain Number 6 Region: 249-341
Classification Level Classification E-value
Superfamily Immunoglobulin 8.43e-16
Family I set domains 0.011
Further Details:      
 
Domain Number 7 Region: 36-140
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000131
Family I set domains 0.008
Further Details:      
 
Domain Number 8 Region: 969-1091
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000419
Family Fibronectin type III 0.0039
Further Details:      
 
Domain Number 9 Region: 140-215
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000134
Family I set domains 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|134025431|gb|AAI35443|
Sequence length 1250
Comment l1cam protein [Xenopus (Silurana) tropicalis]
Sequence
MPLGSGPCLLGTVLVSLLCSHMEAFQLPKGYVMQEIMYPPVITEQSPEKYVLYPNDDIVL
KCEAKRNAKAKYTWKKDGETFQPDNDPRVSRKKDSGTLNISGNGNSMKDFQGKYRCYATN
DLGTAISHEIHVITESTPKWQKELIRPLDIEEGASLILPCNPPKSAVPPRVIWMNSNLLH
ITQDERVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEAISIKVRPTNSVKFR
KPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLLGSTYNERIQFDDFKKTLH
IDKVQDEDDGDYQCIAKNTQGSSSHTFTVVVESAPYWINKPEDGIYAPGEDIILHCEVGG
KPKPKVTWKINGKSLKDSDLYHNWKLIDGSLVLNNMQLNDTSVVQCEARNKHGNLLANAF
VYVVELPPQILTRNDEQYIVVEKTNVSMDCRAFGTPFPTIQWESDLEDNLFALDQFSMHT
NGTLTITGVAKEDEGIYRCTASNNQGNVSISAYLDVRNATKIITPPMEQHARKGGKAIFQ
CKVEFDPKMSDKIIQWRKNGNEIKEDADNDKYFIEDYTLSISNVQESDHGMYTCAAHTEL
DAVELTAELVVIDLPEAPFDLELSNAQETSITLTWTPGNDNNSPIEEFIIEYEEDSFEPG
VWHELTRVDGDMFNVDLDLSPYVNYQFRVIAVNEVGPSNGSNPSDRYETPAFAPAKNPRE
VKGEGTEPQNMYISWKPLKGIDWNGPGFKYLVKWRQLGKEEWKEVVADSPPVLVSGTSIF
EPYEIIVQSVNDIGRATEPKPVIGHSGEDMPDITPENVGLEAMNESAIKVAWLPVQKNGL
NGHLKGFMVYYTRHNGHNRHPGKLLVHGNTTHALITGLKPYSNYSVEVAIINGKGEGEHS
ESRMIRTDEGVPSPPSFLRLERQSDTSLTLIWGPPETPNGILTGYEIYHQIVNKTHTGAK
YFSETINDPTQQNWTLSNISSKDTYRFYLYATTSVGQSEAVMVEGSTMQEIEVPPVLNVS
IETGDNVVTLNWMQLEGPSNAEIRVEIRNKSSELLWRHYGSVNTTDSTFQLSGLLPGTFY
FIRLMALNHTQHVEIWSDMVQTSGTAIPTKQGGFPNEGWFIALITAIVVLLLILLILCFI
KRSKGGKYSVKDKEDTQGDSEARPMKDETFGEYSDNDEKPFTSSQPSLNGEIKQLGSDDS
LADYGGSVDVQFNEDGSFIGQYSGKKEKEPTGGNESSGATSPVNPNVAVE
Download sequence
Identical sequences A4IHA8
gi|134025431|gb|AAI35443| gi|156717286|ref|NP_001096185| ENSXETP00000001607 NP_001096185.1.99540 ENSXETP00000001607

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