SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|183986715|ref|NP_001116947| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|183986715|ref|NP_001116947|
Domain Number 1 Region: 48-511
Classification Level Classification E-value
Superfamily Sema domain 5.1e-125
Family Sema domain 0.0000164
Further Details:      
 
Domain Number 2 Region: 1354-1483,1679-1867
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 3.61e-50
Family p120GAP domain-like 0.035
Further Details:      
 
Domain Number 3 Region: 955-1044
Classification Level Classification E-value
Superfamily E set domains 2.22e-16
Family Other IPT/TIG domains 0.037
Further Details:      
 
Domain Number 4 Region: 1044-1146
Classification Level Classification E-value
Superfamily E set domains 0.0000000000000373
Family Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 0.064
Further Details:      
 
Domain Number 5 Region: 513-563
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000133
Family Plexin repeat 0.0014
Further Details:      
 
Domain Number 6 Region: 862-956
Classification Level Classification E-value
Superfamily E set domains 0.00000000000436
Family Other IPT/TIG domains 0.0085
Further Details:      
 
Domain Number 7 Region: 1143-1224
Classification Level Classification E-value
Superfamily E set domains 0.0000000918
Family E-set domains of sugar-utilizing enzymes 0.049
Further Details:      
 
Domain Number 8 Region: 813-846
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000654
Family Plexin repeat 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|183986715|ref|NP_001116947|
Sequence length 1898
Comment plexin A2 [Xenopus (Silurana) tropicalis]
Sequence
MEQRRILMWTQGPVRLQYWASSSVLIVLAMLSLDFPCASLSNTFNTEHRDWTFSHLTVHQ
TTGAVYVGAVNRIYKLSGNLTLLVSHNTGPGEDNKSCYPPQNVQPCSEPRTLTNNVNKLL
IIDYAENRLLACGSLYQGVCKLLRLDDLFILVEPSHKKEHYLSSVNETGTMYGVIVHTEG
QDGKLFIGTAVDGKQDYFPTLSSRKLPRDPESSTMLDYELYSDFVSSLIKIPSDTLALVS
HFDIFYVYGFSSGNYVYFLTVQPETPEGISSNSANDLFYTSRIVRLCKNDPKFHSYVSLP
IGCTKNGVEYRLLQAAYLTKPGATLARSLKITTQDDVLFAIFSKGQKQYHHPPDDSTLCV
FPIKTINSLIKERLQSCYQGEGHLELNWLLGKDVQCTKAPVPIDDNFCGLDINQPLGGST
MVEGVTLYTESRDRMTSLASYVYNNYSVVFVGTKSGRIKKIRADGPPDGGIPYEVVNVTR
DEIPLLRDMAFSTDNKYLYVMSERQVSRVEVEHCEQYSSCEECLSSGDPHCGWCVLHNTC
SRKDKCERAHEPFRFADNMKQCVKVDVQPNSLPVSEHSLLLTLKVSNVPDLSAGVTCAFG
DLKQEEGQVQSGSRIDCVSPAAKDIPTMLAAQDWFGVELQLISKETGKTFVSTNFKFYNC
SAHQHCLSCVNGDFRCHWCKYRNLCTHDPTSCSFQEGRVNVSEDCPQLVPSEEILIPVGE
VRPITLKARNLPQPQSGQRGYECVLNIQGVVHRMPALRFNSSSVQCQNSSYIYEGMDVSD
LPVDFSVVWNGNFTIDNPQLIKVHLYKCAALRESCGLCLKADHKYECGWCNGEGRCTLHH
HCMSPQNQWLDWSSRNVKCINPRIHEILTVSGPPEGGTRVTIRGANLGLNFSEIAQNVVV
AGVQCTPVEEEYIIAEQIVCEMGQASPTSSSGPVLLCIEECKPEFMARSLQQYTFVSPTV
AHLSPSRGPESGGTMITITGHNLAAGSIVSVTLGNQTCEYYGRSLNEIVCVTAPSTHGLG
PVHVSVSVDRAQLESNLQFEYIDDPKVLRIEPEWSIASGHTSLTVIGTNLDIIQQPRIRV
KSNGKESVNVCKVVNATCLTCLAPALTLEYRPGLDSVERPNEFGFIFNNVQSLLVFNNTK
FIYYPNPTFELLSPNGVLEQKPGSPIILKGRNLCPPATGGAKLSYTVLIGKTPCAVTVSE
TQLLCESPNLTGQHKVTVYVGGMVFSPGSINVIPDSLLTLPAIVSIAAGGSLLLIIVIIV
LIAYKRKSRENDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTSDLDRSGIPHLD
YRTYAMRVLFPGIEDHPVLQELEVQGNRQQSVEKALKLFAQLINNKVFLLTFIRTLELQR
SFSMRDRGNVASLIMTALQGKLEYATDVLKQLLSDLIEKNLENKNHPKLLLRRTESVAEK
MLTNWFAFLLHKFLKECAGEPLFMLHCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQIE
YKTLILNCVNPDNENSPEIPVKVLNCDTITQVKEKILDAVYKNVPYSQRPRAVDMDLEWR
QGRIARVVLQDEDITTKIEGDWKRLNTLMHYQVSDRSVVALVPKQTSSYNIPASASISRT
SISRYDSTFRYTGSPDSLRSRAPMITPDLESGVKVWHLVKNHEHGDQKEGDRGSKMVSEI
YLTRLLATKGTLQKFVDDLFETLFSTVHRGSALPLAIKYMFDFLDEQADRHGIYDTDVRH
TWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQTFMDSCSTSEHRLGKDSPSN
KLLYAKDIPNYKNWVERYYADIAKLPAISDQDMNAYLAEQSRMHAAEFNIMSALNEIYSY
VSKYSVELITALEQDEQGRRHRLAYKVEQLIGAMSFDS
Download sequence
Identical sequences B1WB12
gi|171846959|gb|AAI61575| gi|183986715|ref|NP_001116947| NP_001116947.1.99540 XP_017946561.1.99540 XP_017946562.1.99540

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]