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Domain assignment for gi|187607312|ref|NP_001120605| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|187607312|ref|NP_001120605|
Domain Number 1 Region: 1466-1517
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000053
Family Laminin-type module 0.013
Further Details:      
 
Domain Number 2 Region: 526-574
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000251
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 3 Region: 1376-1424
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000363
Family Laminin-type module 0.0083
Further Details:      
 
Domain Number 4 Region: 283-344
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000023
Family Laminin-type module 0.027
Further Details:      
 
Domain Number 5 Region: 1515-1563
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000193
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 6 Region: 664-710
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000614
Family Laminin-type module 0.0093
Further Details:      
 
Domain Number 7 Region: 342-402
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000642
Family Laminin-type module 0.04
Further Details:      
 
Domain Number 8 Region: 572-619
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000112
Family Laminin-type module 0.0097
Further Details:      
 
Domain Number 9 Region: 479-522
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000279
Family Laminin-type module 0.017
Further Details:      
 
Domain Number 10 Region: 412-456
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000363
Family Laminin-type module 0.021
Further Details:      
 
Domain Number 11 Region: 713-763
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000363
Family Laminin-type module 0.0046
Further Details:      
 
Domain Number 12 Region: 766-807
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000363
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 13 Region: 617-664
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000103
Family Laminin-type module 0.011
Further Details:      
 
Weak hits

Sequence:  gi|187607312|ref|NP_001120605|
Domain Number - Region: 1428-1463
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00781
Family Laminin-type module 0.018
Further Details:      
 
Domain Number - Region: 92-161
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0374
Family APC10-like 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|187607312|ref|NP_001120605|
Sequence length 1649
Comment laminin, alpha 5 precursor [Xenopus (Silurana) tropicalis]
Sequence
MSVPGAACLLLLVPLGLVLAQELPTNGVNGFSLHPPYFNLAEGTRISASATCGEGPDGRP
MEDLYCKLVGGPVSGDPSQTIQGQYCDICMANNREKSHPISNAIDGTERWWQSPPLSRGF
EYNQVNVTLELGQVFHVAYVLIKFANSPRPDLWVLERSTDFGVTYQPWQYFASSKRDCLE
RFGPQTLQRISRDDDVVCTTEHSRIVPLENGEIVVSLVNKRPGAMNFSYSPLLMNFTKAT
TVRLRFLRTNTLLGHLMGKTLRDPTVTRRYYYSIKDISIGGRCVCNGHAEVCGAKDPTNP
YRLHCDCQHNTCGTSCDTCCPGYHQLPWKPATKDNANECEPCNCNGHAYDCYYDPEVERR
RASMDQHGDFVGGGVCVDCQHNTDGVNCERCIVGYYKSPDHPSDSPHTCLRCSCDTEFMD
GSCEDLTGRCYCKPNYTGETCESCAEGYMDFPHCYPVPDTPNGGGTGEQVLTVGEIINCD
CHVAGTEGNACRKDPFVGACVCKPNYWGDSCETCAPGFFGPSCLDCQCSGPGVLDGTCDR
ESGQCQCRSGFEGFLCDQCAPGFFNYPLCQLCGCSPVGTLPQGCDSTGRCLCKPEYDGPR
CEQCIVGYHSYPHCQACSCDPRGAADNNCTPTGHCQCHPNYAGPSCSQCAAGHYGYPSCT
LGPCNPSGSKSLSVNSLEGSCECRDHVEGPACDKCKPLYWNLAPENPHGCTRCQCGSDGT
INGVGECRQATGQCFCKPNICSRTCSTCKDGYYNLQPSSYFGCQGCQCDIGGSIGLACHE
KTGGCQCRENVQGSQCNQPTPGHYFPDLHHLRYEVEDGVTEDGRPVRFGYNPLEFENFSW
RGYAQMSPFQPKVVLTINVTSPDLFRVVFRFVNRGADSVHGKVSFIEERKFNACANCSEQ
TKRIVFPPSTEPAFVTVPQSSFGEPFVLNPNVWSVVIEVENVLLDYLVLLPSAYYEAPIL
QVKVTEACTYSPTPEQNSKNCLLYKYLPLDGFSASGGSDGICRLDNSLPRPCQLEHITPR
HPPMAMCYGNDVDVQFRMAVPHPGRYVVLVEYANEEEVQNTIITVNSPPHRPQQGTFAFY
PCKYSFLCRGVALDQHHRVATFDLTTEATIRFSADRTHFYLSKVYLIPAEQFSMEYVSPR
VHCIATHGTFSPSSGSCVPSRFQKPSQSVVLSEGRTGSIPNNIPLSQGFVPSSPDGQAVP
SQPETLPPTAVDSTRLVHLHPVQSVVGYNGQVQSPGRYAFIVHYYQPSHQTFAIEVRVQG
GRVWQGSANATFCPHGYGCRSLVVSENQVVLDVTDNNFSVTIRVPDGRIVWIEYVLVIPE
DSYSSSYLVEEPLDKSYHFISQCGANSFQSNPANSKFCRDAAISLSLFYNNGAQPCDCHE
AGALGTACEPHGGQCNCRPNVIGRDCSRCATGYWGFPNCRPCDCGSRLCDEVTGQCICPP
RTIKPDCVVCQPQAFGCHPLVGCEECNCSPTGLQNKTEPGCDIQTGQCTCMPNVVGRRCE
RCAPGFYGYPACRPCNCNRDGVELSICDPVTGQCHCKENVEGLTCDHCRLGTFYLDAANP
KGCTRCFCFGATDRCHTASKHRAEFSDMNGWVLVGGDRQEVEISVRPEEGLVDANLEDVP
DVYQEFYWHAPRSYLGDRVSPHLCSFSSL
Download sequence
Identical sequences B1WB74
gi|171846410|gb|AAI61643| gi|187607312|ref|NP_001120605|

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