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Domain assignment for gi|213983135|ref|NP_001135704| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|213983135|ref|NP_001135704|
Domain Number 1 Region: 142-390
Classification Level Classification E-value
Superfamily vWA-like 2.78e-80
Family Integrin A (or I) domain 0.0000000274
Further Details:      
 
Domain Number 2 Region: 386-476
Classification Level Classification E-value
Superfamily Integrin domains 2.88e-30
Family Integrin domains 0.0000674
Further Details:      
 
Domain Number 3 Region: 643-725
Classification Level Classification E-value
Superfamily Integrin beta tail domain 1.83e-20
Family Integrin beta tail domain 0.00018
Further Details:      
 
Domain Number 4 Region: 40-91
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000575
Family Plexin repeat 0.00091
Further Details:      
 
Domain Number 5 Region: 601-642
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000307
Family Integrin beta EGF-like domains 0.0013
Further Details:      
 
Domain Number 6 Region: 559-597
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000223
Family Integrin beta EGF-like domains 0.011
Further Details:      
 
Domain Number 7 Region: 97-165
Classification Level Classification E-value
Superfamily Integrin domains 0.0000523
Family Integrin domains 0.0021
Further Details:      
 
Weak hits

Sequence:  gi|213983135|ref|NP_001135704|
Domain Number - Region: 522-550
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0558
Family Integrin beta EGF-like domains 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|213983135|ref|NP_001135704|
Sequence length 807
Comment uncharacterized protein LOC100216279 precursor [Xenopus (Silurana) tropicalis]
Sequence
MGRRGAPHTARSPLLLALSLLSCLVPSLGGPNVCTTRSATSASCQQCLVTHPQCAWCSQE
EFGGSSTVTSRCDFAHNLISRGCKKEFIEGPGSTVTVIKNLPLSTKESSSSQTNFIQVAP
QKISLSLRPGAAASFKVQVRQVEDYPVDLYYLMDLSLSMKDDLNTIRNLGTILAAEMKKL
TSNFRLGFGSFVDKNISPFSYTAPKYQNNPCTGYKYSPVCVPSFGFRHLLSLTDKTNSFN
AEVQKQRVSRNRDAPEGAFDAILQAAVCGDRIGWRKEASHLLVITTDGVPHIALDGKLAG
LVQPHDGRCHLNEDNEYSASDQLDYPSLALLGEKLSENNINLIFAVTNSHYVLYKNFTAL
IPGTTAEILDQDSQNIIQVIVSAYNNIRSKVELTVSESPEDLSLSFTATCQDGSSHPGVK
KCGDLKIGDTVSFEVSVEARSCPPPGTEQTFTIKPVGFRDSLEVTVTYNCSCSCAQQGEP
ASSKCSGNGTYTCGVCECEAGFLGGRCQCGEEELSSDVTQNTCREAEGKTVCNGRGRCLC
GLCVCYQSEFGLISGSFCQCDDFSCARYKGALCSGHGECDCGECKCHAGYIGDNCNCTIE
TATCLSDDGQMCSGKGNCVCGRCQCIEPGAFGETCEKCPTCPDACGTKRDCIECRLYQTG
QLADNQTCQKLCKDEIVTVEELDTDNPEAAVCIYKTESDCVMRFTYSEESGRSVLRVLKE
PECASAPDTLTVLLAVVGSILLIGLVLLAVWKLLVTIHDRREFSRFQSERTRARYEMASN
PLYRPAVSTHNVDEMYSMLSKSYNGTT
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Identical sequences B5DEV6
NP_001135704.1.99540 gi|197246248|gb|AAI68817| gi|213983135|ref|NP_001135704|

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