SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|301605224|gb|XP_002932249| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|301605224|gb|XP_002932249|
Domain Number 1 Region: 725-845
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-32
Family Cadherin 0.00095
Further Details:      
 
Domain Number 2 Region: 418-530
Classification Level Classification E-value
Superfamily Cadherin-like 1.43e-31
Family Cadherin 0.00068
Further Details:      
 
Domain Number 3 Region: 523-628
Classification Level Classification E-value
Superfamily Cadherin-like 3.43e-29
Family Cadherin 0.00046
Further Details:      
 
Domain Number 4 Region: 834-938
Classification Level Classification E-value
Superfamily Cadherin-like 6.71e-29
Family Cadherin 0.00055
Further Details:      
 
Domain Number 5 Region: 204-307
Classification Level Classification E-value
Superfamily Cadherin-like 4.85e-26
Family Cadherin 0.00093
Further Details:      
 
Domain Number 6 Region: 1621-1806
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.15e-25
Family Laminin G-like module 0.0054
Further Details:      
 
Domain Number 7 Region: 934-1049
Classification Level Classification E-value
Superfamily Cadherin-like 2.14e-25
Family Cadherin 0.0011
Further Details:      
 
Domain Number 8 Region: 309-416
Classification Level Classification E-value
Superfamily Cadherin-like 2.14e-24
Family Cadherin 0.0008
Further Details:      
 
Domain Number 9 Region: 628-729
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-22
Family Cadherin 0.00099
Further Details:      
 
Domain Number 10 Region: 1370-1598
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.06e-20
Family Laminin G-like module 0.0086
Further Details:      
 
Domain Number 11 Region: 2413-2666
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.0000000000201
Family Rhodopsin-like 0.033
Further Details:      
 
Domain Number 12 Region: 1042-1144
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000214
Family Cadherin 0.0094
Further Details:      
 
Domain Number 13 Region: 1310-1348
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000201
Family EGF-type module 0.013
Further Details:      
 
Domain Number 14 Region: 1822-1856
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000406
Family EGF-type module 0.016
Further Details:      
 
Domain Number 15 Region: 1952-1992
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000142
Family Laminin-type module 0.015
Further Details:      
 
Weak hits

Sequence:  gi|301605224|gb|XP_002932249|
Domain Number - Region: 1863-1899
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000262
Family EGF-type module 0.038
Further Details:      
 
Domain Number - Region: 1996-2053
Classification Level Classification E-value
Superfamily Hormone receptor domain 0.000366
Family Hormone receptor domain 0.0061
Further Details:      
 
Domain Number - Region: 1289-1314
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0013
Family EGF-type module 0.077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|301605224|gb|XP_002932249|
Sequence length 2977
Comment PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Xenopus (Silurana) tropicalis]
Sequence
mwalcvwitvlgvlqlagglelhlypgapgganlslgtdwayrlgnnwpavtlspigels
lkpgancsdvplpaslrvtsrrdrtallirlhvyvlgpgchtesrgkgtgahkslpdvdv
eygaeyiaprcppellhrtqgfvaavlggagcrltgstisrtvcggsgaslptmcrgspg
qvlvrvrrklrgrhkrikrstnsspqfqlhnyqasvpenepagtrvtslravdpdtgeag
rleyfmealfdsrsndyfeidsetgtvstsqaldretkdthvlkvtatdfgsprrsatty
ltvtvsdtndhmpvfeqseyrenirenlevgyevmtiratdgdalsnanmlyrllggseg
asavfeidprsgivrtrapvdreavadyqliveandqgkdpgpksatatvyiyvedendn
ypqftekryvvqvpenvspnshilqvqatdrdkgnnaivyysivsgnikgqfyihsftgn
idvihpldyeaireyslrikaqdggrpplsnttgmvtvqvvdvndnapifvstpfqatvl
envpigysvvhiqandadsgdnariqyrltdtppnfpfvinnntgwitvsteldretvel
ytfgveardqgepamtssasvtitvldvndnnptftekayhlrlnedaavgssvltmtav
drdvnsvvtyqitsgntrnrfaitsqsggglitlalpldykqerqyvltvtasdgtrsdt
vlvfinvtdanthrpvfqsshytvsvsedkpigtsivtisatdedtgenarisytmedni
pqfridpdtgtittlieldyedqasytiavtakdngipqksdttyveilildandnmpqf
mrdryvgsvfedvplstsvlqisatdrdsglngrvtytfqggndgdgdfkieptsgiirt
nakldrenvpvynlkvyavdrgnpslkspvdilvtvldindnapvfksneldiyveensp
vgsvvaritasdpdegtnaqimyqivegnnpevfqldlfsgdltalidldyevkteyviv
vqatsaplvsratvhvklldkndndpvlqdfeiifnnyvtnksnsfptgvigkipaydpd
vsdtlhysfiqgnelnllildpstgelklsrdldnnrplealmrvsvtdgvhsvtahctl
rvtiitddmltnsitvrlenmsqekflspllslfvegvatvlsttkdgifvfniqndtdv
ssnilnvtfsallpggvrnkffhsedlqeqiylnrtlltmistqrvlpfddniclrepce
nymkcvsvlkfdssspfissntvlfrpihpinglrcrcppgftgdyceteidlcysnpcg
knglcrsreggyscecheeytgehcevssrsgrcvpgvcknggtcinlliggfkcecppg
eferpycemttrsfppqsfitfkglrqrfhftislilayekkcfkvlfpivpkhkhtsae
nnnypkktnknilvtyretttkvtpyveggvsdgqwhsvqvqyynkpnigrlgiphgpsg
ekvavvtvdecdtavairfgnliknytcaaqgtqtgskksldltgplllggvpnlpedfp
vqnrqfvgcmrnltidnkpidmasfianngtlagcaakknfcdtsfcqnggtcvnkwnty
ycecplhyggknceqampfpqhfqgegivfwtelditvtvpwfiglmfrtrqssgmlmqa
nagpssriniqisnsniqfevysgysriasmkitqtrvsdgewhhllielksskdgkdik
yvaimyldygmyqssveignelpglklksifvgglssndggvdqgfngcmkgvrmgetst
niatlnmnqatvikvdsgctmhnpcdsnpcpynsecsdewgsytchcepgyfgrdcldvc
slnpcehvstctrkpssshgytcecganyygqycenkvdlpcprgwwgnpicgpcncevs
kgfdpdcnktngecrckenyyrpkesdtcypcdcfpsgayargcdmetgqcpckpgvigr
qcnrcdnpfaevtnqgceviyngcpkafeagiwwpqtkfgqpaavpcpkgsvgnairhcs
eekgwlppelfncttlsflelktlneklhrnettldgeksiqiakvlqnatnhtksfygn
dirtgyqmlvkvlkyesqqhgfdlaatrdvefnenviyagsaildhknkhhwdqiqrtea
gtahllkhyedyannvarnmkktymkpfvivapniiiavdifnkanftgakvpefneird
ypkdlessvlfpdtlfkppeinvlptfkpsnqkisskddefdpnlskrkkrqpdpssqya
vamvivyrslgqllpesydpdrrslrvpnrpiintpivsttvhneddplptqleksiile
ytmleteertkpvcvfwnhsiivggsggwsskgcelisrnkshvtcqcnhmtsfavlmdi
srrengevlplkiitytsvavslvallltfillviirtlrsnihnihknlvaalffselv
fliginqtenqfvctviaillhyfymstfawmfveglhiyrmltevrninsghmrfyyvv
gygipaiitglavgldpqgygnpdfcwlsvqdtliwsfagpiaivvtintiifilavkas
cgrrqrafeksgilsllrtaflllllisatwflglmavnsdtmtfhylfaifsclqglfi
fffhcifnkevrkhlkntftgkkplpddtattratlltrtlncnntymddsnmyrtaige
staslestvrdeaaqklsmssgqtragvtevdssiyhrnpriyhyficighdsdtdseds
sdehsslyasshssdseedgidtekkwkqtspknnergpvhstpkvdsfpnhvkpywpad
cmtasdsedqggksklkvetkvnvelhnenkanhcgeaqqdkeneannkesklssnhnnh
qpelrkgilknkvtypppltdknlknrlreklsdynqstissrtsslcsndgvrpltdcg
vtiknprrdhsreqvngmamsvqtgplngetsdsekp
Download sequence
Identical sequences gi|301605224|gb|XP_002932249|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]